Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00619 ATGAAATCTGTTATTGAGCGCTACAACAAGTTGAAAGAGGAACATCATCACCTCATGAATCCGGCTTCAGAAGAGAAGGTCCGTAATGAAGCTTTCATACCAATTGCTAGGACTCGATCAGAATGCAGGCAATTAATGGGTGAAGAACTTACGGGTTTGGGTATTAAGGAACTACAAAATCTGGAAAACCAGCTGGAGATGAGTCTAAAGGGTGTTCGCATAAAAAAGGATCAAATTTTAACTAGTGAGATTAAAGAACTGCGCCAAAAGGGAAATCTCATTCATCAGGAAAATGTTGAACTCTATCAAAAGATGGACCAGATCCAAAAAGAAAATGCAGAGCTAAAGAAGAAGGTTTATGGAGTAAGGAGTACAGGTGAAGAAAATGTGGCATCCAGTCCTTACATGGTCAGAAATGGATATGATTTACATGCACCTATCAGTCTCCAGCTAAGTCAGCCACAGACTCAATACAGTGAACCATCAGCCAAGGCAATGAAACTCGGATTGCAGCTGCATTAG 522 0.4061 MKSVIERYNKLKEEHHHLMNPASEEKVRNEAFIPIARTRSECRQLMGEELTGLGIKELQNLENQLEMSLKGVRIKKDQILTSEIKELRQKGNLIHQENVELYQKMDQIQKENAELKKKVYGVRSTGEENVASSPYMVRNGYDLHAPISLQLSQPQTQYSEPSAKAMKLGLQLH 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00619 173 Coils Coil 98 118 - -
Spst6g00619 173 Pfam K-box region 37 105 IPR002487 GO:0003700|GO:0005634|GO:0006355
Spst6g00619 173 Coils Coil 55 75 - -
Spst6g00619 173 ProSiteProfiles K-box domain profile. 15 111 IPR002487 GO:0003700|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00619 Spst-Chr6 5593103 5597600 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00619 1 165 MADS-box Gene Family AT2G22630 46.821 4.77e-41 136
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00619 K09264 - gmx:100808145 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00440 3 7530768 7531774 Spst6g00619 6 5593103 5597600 PCT