Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00617 ATGAACCAAATCACTCCAAAGATTTCTGATTTTGGCTTAGCCAAATTGTGTTCCAAGAATCGTAGTTTGGTGTCCATGACAGCTGCTAGAGGAACCTTGGGATACATTGCACCTGAAGTTTTCTCCAGGAACTTCGGAAATGTGTCCTATAAGTCTGATATTTACAGTTACGGAATGTTGCTGTTAGAAATGGTTGGAGGAAGGAAGAATGTAGATATGTCATCCGCACAAAATTTCCATGTTCTGTACCCAGATTGGATCCATAACCTGGTTGATGGAGACATACACATCAATGTTGAGGATGAAGGTGACGCTAAAATTGCGAAGAAGCTAGCCATTGTTGGACTTTGGTGCATTCAGTGGCAGCTAGTGAACTGTCCATCCATAAAATCTGTCCCTCCTCCACCCGTAGCTCCTGCACCTATACTTTCTTCATCTGCAGGTGCTGAGAATATACATGCCCATACAAACAATATTGCACCTACAGCCACTTCTGCCCCATCCCCAGTTGATGCACCCAACCCTAGTCCATCACCTGCCATTGCATCAGCACCTTCCCCAGGAGCTACATTGCCTTCAGTATCATCAGTACCATCACCACTACCTTTGGTCTCACCTACATTACCCTCAAGGTCTCCAGCACTATCACCATTATCAGTGCCTTCTAGAGTCCGTCATACACCAGCTGGGGAAGACCAAGAAGTGCATATTCAGGAAGGTGATGCACAATCAAACATTGAGGAGGATCATCCACTTGGCACTAATCTTCCTATCATATCACCTTATGGTCTAGGGTAA 798 0.4499 MNQITPKISDFGLAKLCSKNRSLVSMTAARGTLGYIAPEVFSRNFGNVSYKSDIYSYGMLLLEMVGGRKNVDMSSAQNFHVLYPDWIHNLVDGDIHINVEDEGDAKIAKKLAIVGLWCIQWQLVNCPSIKSVPPPPVAPAPILSSSAGAENIHAHTNNIAPTATSAPSPVDAPNPSPSPAIASAPSPGATLPSVSSVPSPLPLVSPTLPSRSPALSPLSVPSRVRHTPAGEDQEVHIQEGDAQSNIEEDHPLGTNLPIISPYGLG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00617 265 MobiDBLite consensus disorder prediction 168 182 - -
Spst6g00617 265 Pfam Protein kinase domain 5 74 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00617 265 MobiDBLite consensus disorder prediction 159 231 - -
Spst6g00617 265 SUPERFAMILY Protein kinase-like (PK-like) 5 212 IPR011009 -
Spst6g00617 265 ProSiteProfiles Protein kinase domain profile. 1 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00617 265 PANTHER RUST RESISTANCE KINASE LR10-RELATED 3 132 IPR045874 GO:0004672
Spst6g00617 265 Gene3D Transferase(Phosphotransferase) domain 1 1 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00617 Spst-Chr6 5572500 5573297 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00617 2 120 Receptor kinase-like Gene Family AT5G38260 53.600 4.40e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst6g00617 Pkinase 1.6e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00617 - - gmx:102662104 243.432