Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00614 ATGGCTCCTTGCCATGTTGGTCTCCATGCAACCAACTATGTACTCTGTTATGCAGTGGAAATGATGTTCTTGCTTCTTATGATTAGTTTTGCAAACCCACTTTCATTTCGTCACCATGGATTTGAGTATAATGATGCCAGGATTGAAGGAGATGCTACTTTGACACATTCAGAGATCCAACTCACTGCAACCACAAGGTACCAAACCAATGCTTACAGTGTAGGGAGAGTCACAAGTTTTGAGAGATTGCACCTTTGGGACATGAGCACCGGAAAACTCACCGACTTCACTACCCAATTTTCCTTTGTCATTTTCTCAAATGAGACTGCTTTTGGAGATGGCTTGGCTTTTTTCTTTGCAGATCCAGAGCTGCCACTTTCCAATAAAATACAACAAGGAGGTGGTCTTGGTCTTGTGGATGGTAACCAATTATACAAGTCAACTAAATATCCATTTGTAGCAGTGGAGTTTGACACGCACCAAAATTCTTGGGATCCACCTGACACTCATGTAGGTATAAACTTAAACTCTATGAGATCTAACAAAACTGTTCCATGGCCCATTGATATTAGGCAAATGAAAGTTTATTATTGTGTAATTGAGTACAATGCAAGTACTCATAATTTAAATGTTTCTTTCACTGGAAACAAATTCAATGGCAAGCCAATTAAAAGTTATATCTCATGCAATGTTGATTTGAGATATTACCTACCAGAGTGGGTTATTTTTGGCTTCTCAGCTGCTACAGGAGTAATGTTTGAGTTGAACACACTGCAGTCATGGTCATTCCATTCAACTTTGCTAAGTAATGAGAATGGGTCAAATAAGATACCTCCAATTGCAGCCTCACCAACTCCAAATCCTAGTCCTTCACCAATTTCCACTCCTAAGATCAGCCCTAAAAAAGAGGGAAACAAAGGTTTATCGATGGAACTAGAAGTTGGGGTAGGTATAGCTGCAGGTTTCCTTATTTTAGGGTTGGTTTGTATTTTAATGTGGAAGAGAAGGGCTAAAGGGAAAAAAGAAGATTCAATTCTTGATCTGAGCATGGATGAGGAATTCCGAAAGGGCATTGGACCCAAAAGATTTTGCTATAAAGAATTGGTAAGTGCAACAAATAACTTCGCAGAGTCACAAAAGATTGGACAAGGTGGTTTTGGTGGTGTGTACAAAGGCTATTTGAAAGACTTGAACTCTAACGTTGCTGTAAAGAGGATATCAAGAGAATCTAAACAAGGAGAAAAGGAATATGCAAGTGAAGTTAAGATCATCAGCAAATTAAGGCACAGGAATTTAGTACAATTAATTGGTTGGTGCCACATGAAGAAAGATCTCCTCCTTATATCTGAGTTCATGGAAAATGGTAGCTTAGATTCCCACCTATATCGTGGAAAAAGCATTTTGACATGGCAGATGAGGTACAACATTGCCATGGACTTGGCTCTGGCAGTTTTGTACCTCCATGAAGAATGGGAGCAGTGTGTGCTTCATAGGGACATTAAATCCAGCAACATTATGTTGGACTCGAGTTTCAATGCTAAGCTTGGGGATTTTGGCTTAGCTAGGCTGGTTGATCATGACAAAGGATCACAAACCACAATTCTAGCAGGGACAAGGGGCTACATAGCCCCTGAATACTTCACTACAGGGAAGGCTAGGAAGGAATCTGATATATACAGTTTTGGGGTTGTTTTATTGGAGTTAGCCACTGGAAGAAAACCAATTGACCTTAGTGCCAAGGAAGGTCAGATAACCATATTTGAGTGGGTTTTGGAGCTCCATAGATTTGGAAAGTTACTTGAAGTAGTAGACACAAAGCTTGGGGGAGCATTTGATGAGGAACAAATGAAACAGTTAGTGATTGTTGGCCTTTGGTGTGCCAATCCAGATCATACATCCAGGCCATCTGTAAGACAAGTGATTCAAGTGCTTAAGTTTGAAACTCCTTTACCAGTTCTCCCACAAAAATTGTATGAGCCAAATTACCATTCTCCAACAATGACTACAATATTTGCATCAATTTCTTCTCCCCTCTCCGGCTACATGTTAGAACCAAATACAATGTAA 2067 0.3991 MAPCHVGLHATNYVLCYAVEMMFLLLMISFANPLSFRHHGFEYNDARIEGDATLTHSEIQLTATTRYQTNAYSVGRVTSFERLHLWDMSTGKLTDFTTQFSFVIFSNETAFGDGLAFFFADPELPLSNKIQQGGGLGLVDGNQLYKSTKYPFVAVEFDTHQNSWDPPDTHVGINLNSMRSNKTVPWPIDIRQMKVYYCVIEYNASTHNLNVSFTGNKFNGKPIKSYISCNVDLRYYLPEWVIFGFSAATGVMFELNTLQSWSFHSTLLSNENGSNKIPPIAASPTPNPSPSPISTPKISPKKEGNKGLSMELEVGVGIAAGFLILGLVCILMWKRRAKGKKEDSILDLSMDEEFRKGIGPKRFCYKELVSATNNFAESQKIGQGGFGGVYKGYLKDLNSNVAVKRISRESKQGEKEYASEVKIISKLRHRNLVQLIGWCHMKKDLLLISEFMENGSLDSHLYRGKSILTWQMRYNIAMDLALAVLYLHEEWEQCVLHRDIKSSNIMLDSSFNAKLGDFGLARLVDHDKGSQTTILAGTRGYIAPEYFTTGKARKESDIYSFGVVLLELATGRKPIDLSAKEGQITIFEWVLELHRFGKLLEVVDTKLGGAFDEEQMKQLVIVGLWCANPDHTSRPSVRQVIQVLKFETPLPVLPQKLYEPNYHSPTMTTIFASISSPLSGYMLEPNTM 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00614 688 ProSiteProfiles Protein kinase domain profile. 375 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00614 688 Pfam Protein kinase domain 376 642 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00614 688 FunFam Lectin-domain containing receptor kinase A4.3 452 664 - -
Spst6g00614 688 FunFam L-type lectin-domain containing receptor kinase IX.1 360 451 - -
Spst6g00614 688 SUPERFAMILY Protein kinase-like (PK-like) 360 669 IPR011009 -
Spst6g00614 688 ProSitePatterns Serine/Threonine protein kinases active-site signature. 495 507 IPR008271 GO:0004672|GO:0006468
Spst6g00614 688 SMART serkin_6 375 650 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00614 688 ProSitePatterns Protein kinases ATP-binding region signature. 381 404 IPR017441 GO:0005524
Spst6g00614 688 Pfam Legume lectin domain 34 273 IPR001220 GO:0030246
Spst6g00614 688 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Spst6g00614 688 CDD STKc_IRAK 381 645 - -
Spst6g00614 688 Gene3D Transferase(Phosphotransferase) domain 1 452 663 - -
Spst6g00614 688 PANTHER - 51 648 - -
Spst6g00614 688 CDD lectin_legume_LecRK_Arcelin_ConA 34 267 IPR001220 GO:0030246
Spst6g00614 688 MobiDBLite consensus disorder prediction 281 295 - -
Spst6g00614 688 MobiDBLite consensus disorder prediction 276 302 - -
Spst6g00614 688 SUPERFAMILY Concanavalin A-like lectins/glucanases 33 274 IPR013320 -
Spst6g00614 688 FunFam L-type lectin-domain containing receptor kinase IX.1 32 276 - -
Spst6g00614 688 Gene3D Phosphorylase Kinase; domain 1 360 451 - -
Spst6g00614 688 Gene3D - 32 278 - -
Spst6g00614 688 ProSitePatterns Legume lectins alpha-chain signature. 237 246 IPR000985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00614 Spst-Chr6 5558755 5560821 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00614 15 663 Receptor kinase-like Gene Family AT5G10530 42.836 2.47e-168 496
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Spst6g00614 Pkinase 1.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00614 - - gmx:100814713 1098.19