Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00598 ATGGAGGGTCACGGAGGAGGGACTAGAGGGGAAGCGGAGCGGTGGCTATACACGGCGAATAAGGTATTAAGCGCACGTGACCTACACGGGGCACGCTCATTTGCGATCCGGGCCCGAGAGTCGGACCCGAGATACGAGCCCACGGAGCTTCTTTTGACGGTTATCGATACTCTTATGGCCGGCGAGGCCCGGATCAACGACAATCTCGACTGGTACGCCATCCTCCAAGTGCTCCGTTACACTCAGAACATTGACTACATCGCCGCCCAGTACCGCCGCCTCGCCACCCAGCTCGACCCTCATCACAACCCCTTCGCCTTCGCCGCTCACGCCTTCACGCTCGTCAACGACGCCTGGTCCGTACTCTCCAACGCCACCAAGAAAGCCTTTTACGACAACCAACTCAGACTCCTCACTCAACCCCCTCCTCCGCCTCCTCCCCCGCCGCCGCACACGCAACCTCCAGCGCCTCCGGTTACCTTTTTCCCGATTCAACCGCCGCAACCGAACCTAAACCCGACCCCGACCCCGACCCCGTACCAAATCCCTCAGCGGGAACAAAGCCCTCTGCCTAGGGTAGATATGGAGGCGCCGAGTCCAGAGGACAATGCGAGCGAGTGGACTCAAGGGAGTGAGACCGGGAACGAAGGGGCAAGTTTCTGGACCGCGTGCCCTTATTGTTACGTTATGTACGAGTATCCGAAGGTTTACGTGGATTGTACGCTGCGGTGTCAGAGTTGTCGGAGGGGGTTTCATGCGGTGGTGGTACGGTCGCCGCCGAAAGATGGCTTTGGTTCGTTTTGCAGTTGGGGTTTTATCCCTGTGGGGTTTTCTGGGGATTTTAGAGACATTAACGGTTCTTCCTCCAAGTGGAACCCTTTTTCCCCTTTGTTTCCTTGCGCTTTCAAAGGGGGGGAGGAGAGTAGGAGGCACCGAAAGGGGTCGTATGTTTTCTACGATGATGATGCGTCTGCGGAGTTCGCGGAGGACTCCGACACGACGGAGGATGATTCCGATGATGATTGGCGTGGCGAGAGTCGGAAGGGGATGGTGACGGTGAGGAAGAAAAGGAGGAGAAAGAGTGGGAAGAAGAGAAGCAATGGTGGTGGTGGTGATGTTATGAGTGAACCGATTGAGCGGCCTAGGAGAGGGATTCATAATCATAATGATGATGTTAGTAATGGGATTGTGGAGAATGGTGAGGCTGCGGATGATGATGCTGTTGTGGCGTTGCCAGAATCTAGTAAGAAGGCTCCGTTGGGTGGTTCGAGGAGGAGGAGTGAGAGGAACTTGGGGAAGTTGGATTTGAATGTGGAGTTCAGCAATGAGGTGGAGGAGACTGTGCATGGAGTGGATGAGGGGAATGAAAACGGAGATGGGAATGAGAATGTGAATGCTGAGGATAATATTGAAGGGATTGGTTTTTTTGAGGGGCTGGACGAGTTCCTTAGTAGCTTGCCCATTCTCAATGTTGTTGCAGATGACAAGGTTAAGGATCATTAG 1503 0.5462 MEGHGGGTRGEAERWLYTANKVLSARDLHGARSFAIRARESDPRYEPTELLLTVIDTLMAGEARINDNLDWYAILQVLRYTQNIDYIAAQYRRLATQLDPHHNPFAFAAHAFTLVNDAWSVLSNATKKAFYDNQLRLLTQPPPPPPPPPPHTQPPAPPVTFFPIQPPQPNLNPTPTPTPYQIPQREQSPLPRVDMEAPSPEDNASEWTQGSETGNEGASFWTACPYCYVMYEYPKVYVDCTLRCQSCRRGFHAVVVRSPPKDGFGSFCSWGFIPVGFSGDFRDINGSSSKWNPFSPLFPCAFKGGEESRRHRKGSYVFYDDDASAEFAEDSDTTEDDSDDDWRGESRKGMVTVRKKRRRKSGKKRSNGGGGDVMSEPIERPRRGIHNHNDDVSNGIVENGEAADDDAVVALPESSKKAPLGGSRRRSERNLGKLDLNVEFSNEVEETVHGVDEGNENGDGNENVNAEDNIEGIGFFEGLDEFLSSLPILNVVADDKVKDH 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00598 500 MobiDBLite consensus disorder prediction 136 214 - -
Spst6g00598 500 MobiDBLite consensus disorder prediction 138 184 - -
Spst6g00598 500 SMART dnaj_3 69 127 IPR001623 -
Spst6g00598 500 SUPERFAMILY Chaperone J-domain 64 136 IPR036869 -
Spst6g00598 500 CDD DnaJ 70 124 IPR001623 -
Spst6g00598 500 ProSiteProfiles dnaJ domain profile. 70 135 IPR001623 -
Spst6g00598 500 Pfam DnaJ domain 70 132 IPR001623 -
Spst6g00598 500 MobiDBLite consensus disorder prediction 327 397 - -
Spst6g00598 500 MobiDBLite consensus disorder prediction 350 364 - -
Spst6g00598 500 Gene3D DnaJ domain 59 140 IPR036869 -
Spst6g00598 500 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 4 367 - -
Spst6g00598 500 ProSitePatterns Nt-dnaJ domain signature. 112 131 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00598 Spst-Chr6 5384458 5385960 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00598 11 498 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 39.683 6.31e-94 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00598 - - gmx:100818960 654.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst3g00405 3 7101570 7103009 Spst6g00598 6 5384458 5385960 PCT