Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00574 ATGCTGGGTCCTGGACATAACAAAACAAGGACATTTAGTATACTAATTCTGCTTATGGCAAACTGCATGTATATATATAATCATTTGACTTTCAGGCCTATGTTTTTAAATTGGATGGTGGCTCCAAAAATATGGATTCTTCTTTCTACAAGCCAGTATTGGTCCCTTCTCACAGAAGATTTCTTCTCCTGCAAAGCAATGGACTTCTTGAAGGTCCTCTTCCACTTCTTCATGTTTTTTCCTGTCACATATGCCTCATATGACTGCCAATATTATTCTTGGTGCAGCGACAACAACATCCTTATTCGTTTTCCCTTCCAAATACAAGGTCAGCAAAATCCTTATTGCGGCTATCCTGGTTTCAGATTAACTTGTTCCAATGACAGCAAAACAGTTATAACACTTCCTTACTCGGGAAAGTTCTTTGTCCGCAACATTAGCTATCTCAGACAAGAGATGCGAGTCCATGACCCTGATAATTGCCTTCCCAAACGTCTTCTAAGCCTCAACCTTTCAGGTTCTCCATTTATCGCCACTTCACTCCGCAACTACACCGTCTTAAGGTGCCCGACTCGGATCACAGGGTCACAGTTCATTCCCATCGAATGTCTTAGCAATTCTACATCTTTTGTGTCCGCTATTCCTTCAGTGAACTTCACCGATTCATTGCCCGACTCTTGCCATGTTATAAAGAACCTCTCATTTGCAAGACCTGGACCATATGATGAAAATCTCACCCATGACTTCAGTCGAGATCTTCGATTAACATGGTATGCACCTGACTGTAGATATTGCGAATCACAAGAAGCTTTGTGCGGATTTGAGACCATAAACAGTGATCAAGTTGGTTGTTTTTCTGATTACCAAACGGGTAAATTTACTCCTCTGTGCCCTTTAATTTGTTCTTTTATAATTTTTTAA 921 0.405 MLGPGHNKTRTFSILILLMANCMYIYNHLTFRPMFLNWMVAPKIWILLSTSQYWSLLTEDFFSCKAMDFLKVLFHFFMFFPVTYASYDCQYYSWCSDNNILIRFPFQIQGQQNPYCGYPGFRLTCSNDSKTVITLPYSGKFFVRNISYLRQEMRVHDPDNCLPKRLLSLNLSGSPFIATSLRNYTVLRCPTRITGSQFIPIECLSNSTSFVSAIPSVNFTDSLPDSCHVIKNLSFARPGPYDENLTHDFSRDLRLTWYAPDCRYCESQEALCGFETINSDQVGCFSDYQTGKFTPLCPLICSFIIF 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00574 306 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 69 287 IPR046948 -
Spst6g00574 306 Pfam Wall-associated receptor kinase galacturonan-binding 89 157 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00574 Spst-Chr6 5230809 5231729 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00574 95 291 C3H Transcription Factor Family AT2G25410 42.574 1.56e-39 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00574 - - gmx:100799895 371.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00574 6 5230809 5231729 Spst4g01965 4 60294706 60297757 PCT