Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00570 ATGGGCGAGAATGAGGGGTGGGCACAACCACCAATTGGGATGTTGCCTAATGGCTTGCTGCCCAATGAGGCCGCACCGGTGATGCGAGTGCTTGACATGGAGCGATGGTTGAAGGCTGAGGAAAGGACTGCAGAGCTAATTGCCTGCATTCAGCCCAATCCGCCCTCTGAGGAGCGCCGCCATGCAGTTGCAGTCTATGTGCAGCGGCTGATAATGAAGTGCTTCCCTTGCCAGGTGTTCACCTTTGGGTCAGTACCCCTCAAAACTTATTTACCTGATGGAGATATTGACTTGACAGCATTCAGCAAGAACCAAAATCTGAAGGATGCGTGGGCACACCAGGTTCATGACATGCTCCAGAATGAGGAAAAGGATGAAAATGCAGAGTTTCATGTCAAAGAGGTTCAGTACATCCAGGCTGAAGTGAAGATTATAAAGTGTCTTGTTGAAAATATTGTGGTGGACATTTCATTTAACCAACTCGGAGGATTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAATTTGATTGGCCAAAACCATTTATTCAAGCGTAGCGTTATACTTATAAAAGCCTGGTGTTACTATGAGAGTCGGATACTTGGTGCCCACCATGGACTTATCTCAACTTACGCATTAGAAACTTTGGTTCTTTACATATTTCATGTTTTCAACAATTCCTTTGCTGGACCTCTTGAGGTATTGTATAGGTTTTTGGAATTTTTTAGTAAGTTTGATTGGGATAATTTCTGTGTAAGCCTATGGGGTCCTGTACCCATTAGTTCACTTCCAGATGTGACAGCTGAACCTCCTCGCAAAGATGGTGGGGATTTATTGCTGAGCAAGTTATTTCTTGATGCCTGCAGCTCAGTTTATGCTGTTTTCCCTGCTGGCCAAGAAAATCAGGGGCAGCCTTTTACTTCCAAGCATTTCAATGTTATTGATCCTTTGCGGGTCAACAATAACCTTGGGCGTAGTGTCAGCAAAGGAAATTTCTTTAGAATACGCAGTGCTTTTGCATTTGGGGCCAAAAGGCTTGCTAGATTGCTTGATTGCCCACAGGAGGATTTGTTTTTGGAAGTCAATCAATTCTTTATGAACACTTGGGTCAGACATGGAACTGGGCAGCGGCCTGATGCTCCAAGCAGTGACTTATGGCGTTTGACATTATCTAGTCACGACCATTTACAGGGGTCCGAGAATCTCCAAAAGAATAGCCAGAAAACTGATAATACCTGTAATAATGAATTTCAAGTGAAAGGGGTGCATGCAGCACAAAGTGTTCTATCTCAACATTTATTGTCGTCTAAAAGTTTATCTAAGAGTAGTAGTGATTCCAGAGCTAACCAAAATAATGCAAGGAATTTTGATCAGGTCAAAAGGGAAGCTAATTGTAATCAAGGTGCTCGGAATGATAAGGGACACAGAAAGGCCAAACCAAATAACCCATTCAATGAGGTCCCAGGAAGGCTTTTATTTGCAAGAACATGTTCTAGTCCTGAGTTGACGGACTCTTACAGTGAAGCTCCTAGACAAGGAAGACATACAAAAGCCCCCGAAAGTGGGAAAGGCCCAACTTCCTCTGCAAAGTTTGAGAATAGTCACAGGAAGCATCTTGATTCTGACATGCCTGCTAGTTATGGCATTAGAATTGACGATTCATCTGGTAGGAAAATAATATCACATCAGTTTCTTGATAGCAGTGCTGATTCAAACAATGGCTCAAATAGTAATGATAATGAATCAGGCCCGGGCTTTGTGGATGAAGAATTTTCTTCTGTTGCTGGACTAGGTGGAAAGAATATGATGCATCAGGAGGAGCAGGACCTTTTGAACATGATAACATCCCCCACAACCCAAGGTTCCAGTGGAGAGAATCACATTCCAGTGAATTTAACCCCAGGTCACCTACCACTTTCACCTTCCATTCTTGCATCAATGGGATGTGCTCATAGGAATATAGGTAACATTCCCTTCATTGAGTCGTTTAATTGGGGTACTAATGTGCAATTTCCCCAAGGTTTAGTCCCTTCACCATGGACTCCATATTTCCCTGGCGTAGGATTGACCTCAAATCCTGAAGATTTAATTGAAACTGGTAATGAGAATTTCAATACTGTTGAAACAAGTCTAGCAGAAGCTGATAAAGATTTCTGGCATGAGCAAGAAAGGGCTTCTGCTAGGGGGGTTGAAGCTGACAATGGAAATTTTGAAATGCTTCCAGATGATGAGCGACAGTCAATTTCAGGTGTCTATAACTTTATACCATCATCTCATGTTGGCAGCTCTAGTAATTCTGCTAGACAGAAGACGACGTCTACTAAAGAAAACCAAGATTCTATGAGAGAAGAGCACATTGATAGTCCTAAATATCAAGATGGCAGAGGAAACGGTGCATATTTTGATGATAGAATAGCAAATCCTAGGTTGCCCAGTGCACCATCTTCAAGCTCCTTCAGAAGTAAGACATCTTCAGAAAGCTCTTGGGAGGGTTCTTCAGCAAAATCTTCAAAATCAACTCGGGAGAAAAAAGGGAAGAAAAATACTTCCTCAGTGCCATCTTCTGCTCACGGAAAGGGCAAGAATGCTACGGAAATTTCATCTGGTCTAGTGGATGATGAAAACAGGCAATGGACACCTTTGTCAACTACAGCATCTGATATATCAGACAGAAGTACTCGGCCACTGGCTGTTGCTCCAATGCATGTTCCAAGACAGCCACTGTCTGGTTCTGAAATGGTTCGGACAAGTGGATCAGATTCTGTGTTACCCATGGCTCCAGTGGTTATAGGTCATGGTTCTAGCCAAAGAACAGGGGATAATTCTGGGGTTTTTCCTTTTGCATTCTATCCCACAGGGCCACCAGTGCCATTTGTTACCATGCTTCCATTATATAATTTTCCTACTCAATCGTCTCAGACATCAGCAAGCAATTTCCATGGGGAAGAGGATGTAGATAGCAATGACCGAGGTCAGAATTTTGATCCATCTGAGGTGTATGATCAGCCTGAGGTGTTGAGCTCTTCCAATTCTACGAGAAGAACTGCTATTGACACGTCAGAGCCCAATCCTGACATTCTTAATGGTGACTTTGTTAGCCATTGGCAAAATTTGCAATATGGGCGAATTTGTCAAAATTCACGCCATCCCGATTCAGTTATCTATCCTTCATCTGTTGTGGTACCTCCTGTTTATTTGCAGGGTCGGTTTCCTTGGGATGGTCCTGGAAGACCACAGTCAGCTAATGTGAATCTTTTCACTCAGCTTATGAACTATGGGCCACAGCTAGTGCCTGTTGCTCCTATCCATTCAGTTTCCAACAGACCAGCCAATATTTACCAACGATTCATAGATGAGATACCACGGTATCGAAGTGGGACAGGAACCTACTTGCCAAATCCTAAGGTTTCTGTTCGGGATCGACATTCTACAAGCACCAGAAGGGGTAATCACAACAATGACAGAAGTGATCAGCATGGTGACAGAGAAGGGAATTGGAATATTAACTCAAAGTTGAGAACAAGTGGGCGAAGCCATTACCGCAGTCAAGCTGAGAAGTCTAGCTCAAGGCCAGAAAAGTTGGCAACAAGCGAGAGCCATTCCGAAAGACCATGGGGTTCACATAGACCAGACTCTTTTGTTTCTCACCAGAATGGTGGTACTGTCCGGTTAAATTCCTCACAGAACAGTCCGACAAATGTGGCTAATGGAATGTACCCTCTACCGGGCATGCACTCCAGTGGAATCTCATCAAATGGACCAACAATTCCACCTGTTGTAATGTGGTATTCATATGATCACAATGCTAGCTACAGCACACCAGCAGAACAGCTAGAATTTGGAAGTCTGGGACCTATGGGTTTCCCGGGTGTCAATGAAGTATCACTGCTTAATGAGGGGAGCCAATCTGGTGGAGCATTTGAGGAGCAAAGGTTTAATGGTGGCACTGCTCAACAATCCTCTCCAGATCAACCCTCTTCACCTAAGTTCCCAAGGTATTCAAATTTCCCTGGTGATGAAGTGCCTTATTTAGGGGCTTTGATTCTATTGCCAGATCAGTGGTCAGGTGGAATTATTAACCTAAAGAGGAGGATAATTATCTCCCCTTGCATATCATCAAGACGGCCAGGCAGGGAAAGAAAGAACTTTTGCTCTTCCTCTGATTCTCGTTTCTGGGGAATGCCCTTCGTTTATGCCCTGCCTCTTGTACCCTTACAGGTGCTAATTTGTGCTGAAATGCCACCGGAAAGAAAGGCTATTGAAGTTGATATGTTGTGGTTTGAAGACTGTAAATCAGAGTCATCTTTTAGCATGGAGCAAGAAGACTCTATTAACGATGGAAATCAAAGAAGGAGACCAAGTTTGAGTGCTGTTTTGAGGAGTATAGGAAGAAGGGTTGAGAGTGGATCAGCGAAGATGAAGAACTTGAGAAGAGCTTCAACTGTTCATCCCTTGAGTAATGGACAGAAAAAGCTGCCACCTAAGAAGAAAATTCTTGATCCACAGGGTCCAATACTTCAGAAATGGAACAAAATCTTTGTAATAACGTGTGTGTTAGCAGTCTCTGTGGACCCGTTCTTCTTTTACATTCCAGTGATAAATAATGATGAAAAATGCCTTGATTTGAGTGGATCGTTGCAGATCACTGCCAGTGTTTTTCGCACCTTCCTTGATCTATTCTACATCCTTCGCATAATCTTTCAGTTTAAGACAGGCTTTATTGCCCCTCCATCTCGTGTTTTTGGAAGGGGTGAGCTCATCAATGATCCTGTGGCTATAACGAAAAGATACTTAACTTCACACTTCATCATTGATATTTTATCAATTATTCCACTTCCACAGGTGATTGTTTTAGCCATACATCCAAACATGAAAACAGATCCATTTGTTGCGAAGGATTTGTTGAAGTATTCAGTATTAATCCAGTATGTGCCAAGGCTTTTGCGGATCTATCCTCTATTCAAAGAAGTAACTAGAACTTCTGGCATATTAACTGAGACAGCAGGAGCTGGTGCTGCTTATAATCTTTTTCTTTATATGCTAGCAAGTCATGTGGTTGGAGCTTTCTGGTATTTGCTATCGGTAGAGTCAGAAGTGCGTTGCTGGCGCAGAGAGTTGAAGAGTGGTGGAGACTTGAGTTGTAGAAACCGCAATCATGAAATCATTTCGCGTCTCAATGAAACTTGTTCTTTGGTTGACCCTGATAATATCATAGGCCCAAACATCTACAATTTTGGAATATTTTTTGATGCTTTACATTCAGGTGTGGTAAAATCAACAACAGATTTTCCTCAGAAGTTCTTCTATTGCTTTTGGTGGGGTTTGCGCGGTTTAAGTTCTCTTGGACAAAATCTCCAGACAAGTACTTATGTCCCAGAGATACTCTTTGCAATCTTCATTGCCATCTTTGGATTGGTTTTATTCTCGTTACTTATTGGAAACATGCAGAAATATCTGCAATCTACAACTGTTAGAGTGGAGGAGATGAGAGTGAAGAGACAGGACGCAGAACAGTGGATGTCCCACCGTATGCTGCCTGAGAACTTGAAAGAAAGAATTAGACGGTATGAACAGTACCAATGGCAAGAAAATAGGGGTGTTGAGGAGGAGGCATTAATTGGTAAACTTCCTAAAGATCTCAGAAGGGACATAAAGCGTCATCTTTGCCTGGATTTAGTTAAAAAAGTGCCAATGTTTGAGAAAATGGATGAGCAGTTGTTGGATGCAATGTGCAGTAGACTGAAGCCAGTCCTTTATACTGAGAAGAGCCAGATTTTTCGTGAAGGAGATCCAGTTGATGAGATTCTTTTCATTATGCGTGGAAAAGTGTCTACTGTGACAACAAATGGTGGAAGAACTGGTTTCTTCAACTGTTTGCTTCTCAAAGCTGGTGACTTCTGTGGAGAGGAACTTCTGACATGGGCCTTGGATCCTAACTCCTCCTCGAATCTACCCATTTCAACTAGGACAGTAGAAACTATATCAGAAGTTGAAGCCTTTGCTCTCATGGCGGATGACTTGAAGCTTGTTGCTTCCCAATTTCGCCGTCTTAGCAACAAACAGCTCCAACACGCTTTCAGGCAAGACTTCATATGGAAGACATGGGCTGCCTGTTTTATACAAGCAGCTTGGCGTCGATACTTGAAAAAGAAGATTGATAGGTCTTTGCACGACGCAGAAGACAAGCTACAAGATGCTTTTGCAAAGGAGGATGGCTCTACTCTAAGCCTTGGTGCAACAATATATGCATCAAGGTTTGCTGCCAATGCACTGCGAAACTTGAGAGAAAATGGCAGACACAATAGAATGCAACAGAGACTACTGCCTCTGCTACCTCAAAAGCCAGCCGAGCCAGATTTCACTACTCAGAAACTCTAA 6378 0.429 MGENEGWAQPPIGMLPNGLLPNEAAPVMRVLDMERWLKAEERTAELIACIQPNPPSEERRHAVAVYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDAWAHQVHDMLQNEEKDENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLIGQNHLFKRSVILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVLYRFLEFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPAGQENQGQPFTSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPQEDLFLEVNQFFMNTWVRHGTGQRPDAPSSDLWRLTLSSHDHLQGSENLQKNSQKTDNTCNNEFQVKGVHAAQSVLSQHLLSSKSLSKSSSDSRANQNNARNFDQVKREANCNQGARNDKGHRKAKPNNPFNEVPGRLLFARTCSSPELTDSYSEAPRQGRHTKAPESGKGPTSSAKFENSHRKHLDSDMPASYGIRIDDSSGRKIISHQFLDSSADSNNGSNSNDNESGPGFVDEEFSSVAGLGGKNMMHQEEQDLLNMITSPTTQGSSGENHIPVNLTPGHLPLSPSILASMGCAHRNIGNIPFIESFNWGTNVQFPQGLVPSPWTPYFPGVGLTSNPEDLIETGNENFNTVETSLAEADKDFWHEQERASARGVEADNGNFEMLPDDERQSISGVYNFIPSSHVGSSSNSARQKTTSTKENQDSMREEHIDSPKYQDGRGNGAYFDDRIANPRLPSAPSSSSFRSKTSSESSWEGSSAKSSKSTREKKGKKNTSSVPSSAHGKGKNATEISSGLVDDENRQWTPLSTTASDISDRSTRPLAVAPMHVPRQPLSGSEMVRTSGSDSVLPMAPVVIGHGSSQRTGDNSGVFPFAFYPTGPPVPFVTMLPLYNFPTQSSQTSASNFHGEEDVDSNDRGQNFDPSEVYDQPEVLSSSNSTRRTAIDTSEPNPDILNGDFVSHWQNLQYGRICQNSRHPDSVIYPSSVVVPPVYLQGRFPWDGPGRPQSANVNLFTQLMNYGPQLVPVAPIHSVSNRPANIYQRFIDEIPRYRSGTGTYLPNPKVSVRDRHSTSTRRGNHNNDRSDQHGDREGNWNINSKLRTSGRSHYRSQAEKSSSRPEKLATSESHSERPWGSHRPDSFVSHQNGGTVRLNSSQNSPTNVANGMYPLPGMHSSGISSNGPTIPPVVMWYSYDHNASYSTPAEQLEFGSLGPMGFPGVNEVSLLNEGSQSGGAFEEQRFNGGTAQQSSPDQPSSPKFPRYSNFPGDEVPYLGALILLPDQWSGGIINLKRRIIISPCISSRRPGRERKNFCSSSDSRFWGMPFVYALPLVPLQVLICAEMPPERKAIEVDMLWFEDCKSESSFSMEQEDSINDGNQRRRPSLSAVLRSIGRRVESGSAKMKNLRRASTVHPLSNGQKKLPPKKKILDPQGPILQKWNKIFVITCVLAVSVDPFFFYIPVINNDEKCLDLSGSLQITASVFRTFLDLFYILRIIFQFKTGFIAPPSRVFGRGELINDPVAITKRYLTSHFIIDILSIIPLPQVIVLAIHPNMKTDPFVAKDLLKYSVLIQYVPRLLRIYPLFKEVTRTSGILTETAGAGAAYNLFLYMLASHVVGAFWYLLSVESEVRCWRRELKSGGDLSCRNRNHEIISRLNETCSLVDPDNIIGPNIYNFGIFFDALHSGVVKSTTDFPQKFFYCFWWGLRGLSSLGQNLQTSTYVPEILFAIFIAIFGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRQDAEQWMSHRMLPENLKERIRRYEQYQWQENRGVEEEALIGKLPKDLRRDIKRHLCLDLVKKVPMFEKMDEQLLDAMCSRLKPVLYTEKSQIFREGDPVDEILFIMRGKVSTVTTNGGRTGFFNCLLLKAGDFCGEELLTWALDPNSSSNLPISTRTVETISEVEAFALMADDLKLVASQFRRLSNKQLQHAFRQDFIWKTWAACFIQAAWRRYLKKKIDRSLHDAEDKLQDAFAKEDGSTLSLGATIYASRFAANALRNLRENGRHNRMQQRLLPLLPQKPAEPDFTTQKL 2125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00570 2125 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 352 - -
Spst6g00570 2125 Gene3D - 1511 1822 - -
Spst6g00570 2125 Gene3D Helix hairpin bin 1825 1889 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 1124 1237 - -
Spst6g00570 2125 SUPERFAMILY Nucleotidyltransferase 20 201 IPR043519 -
Spst6g00570 2125 Gene3D - 162 358 - -
Spst6g00570 2125 Coils Coil 2049 2069 - -
Spst6g00570 2125 FunFam Cyclic nucleotide-gated ion channel 1 1896 2014 - -
Spst6g00570 2125 Pfam Ion transport protein 1509 1826 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Spst6g00570 2125 MobiDBLite consensus disorder prediction 754 919 - -
Spst6g00570 2125 SUPERFAMILY cAMP-binding domain-like 1827 2023 IPR018490 -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 436 465 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 566 591 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 971 1025 - -
Spst6g00570 2125 Gene3D Jelly Rolls 1896 2016 IPR014710 -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 1300 1331 - -
Spst6g00570 2125 FunFam PAP/OAS1 substrate-binding domain superfamily 52 161 - -
Spst6g00570 2125 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 1140 1166 - -
Spst6g00570 2125 FunFam Cyclic nucleotide-gated ion channel 1 1825 1889 - -
Spst6g00570 2125 SUPERFAMILY Voltage-gated potassium channels 1500 1820 - -
Spst6g00570 2125 ProSiteProfiles cAMP/cGMP binding motif profile. 1898 1982 IPR000595 -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 436 550 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 775 791 - -
Spst6g00570 2125 SMART cnmp_10 1898 2029 IPR000595 -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 1300 1332 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 1002 1022 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 1211 1236 - -
Spst6g00570 2125 FunFam PAP/OAS1 substrate-binding domain superfamily 162 358 - -
Spst6g00570 2125 CDD NT_PAP_TUTase 59 166 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 754 774 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 566 583 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 1178 1209 - -
Spst6g00570 2125 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 17 1329 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 810 835 - -
Spst6g00570 2125 CDD CAP_ED 1898 2027 IPR000595 -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 849 891 - -
Spst6g00570 2125 MobiDBLite consensus disorder prediction 466 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00570 Spst-Chr6 5200704 5214457 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00570 1427 2122 Ion Channels AT5G53130 62.309 0.0 884
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00570 - - gmx:100809742 1882.84