Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00533 ATGTCATTGCTATGCCTATGTAATTCTAAGGCAGTGACGTACATAGTTCACATGAACAAGTCTTGCATGCCCAAAGTTTTCACCTCCCAACTCCACTGGTATTCATCCACCGTTACTTCTCTGGACTCCGCCACTCCACCAGCTAACCCTACTATTTTGTACTCTTACGAGAACGCACTTCACGGTTTCAGTGTTGCCTTATCACCACATCAGTTAGAGGCTCTAAAACAAACCCCAGGTTTCATCTCAGCATACAGAGACAGAGCAACCACTCTTGACACCACCCATTCCTACCGCTTCCTCTCTCTTAACACCTCCCATGGCCTCTGGCCCGTTTCCAACTACGGCCAGAACGTCGTCGTTGGCGTTGTCGATTCAGGAATCTGGCCCGAGAGCGACAGCTTCATGACGATGGCATGGTACTTCAACAAAGGCGTTCTCGCGGCGCACGACGGTGATGACCTCACGAAAGTTGGCGCCAACTCCGTCAGAGACAGCAACGGACACGGAACCCACACTGCGTCCACGGTGGCGGGAAACTACGTAAAGGGCGCGTCGTATTTCGGTTACGCCAAGGGGACGGCAAGAGGAATTGCGCCACGTGCTAAAATTGCCATGTACAAGGTTGCTTGGGCCCAAGGCGTGTTCACCTCGGACATGCTCGCAGGTTTGGACCAAGCAATCGCTGACGGAGTGGACGTTATTTCCATCTCGATGGGTTTGGACATGGTGCCCTTGTATGAGGATCCTGTCGCAATCGCCGCTTTCTCTGCTTTGGAGAAAGGCATCGTGGTTTCAGCTTCTGCGGGAAACGCAGGTCCGTCACTGTGGTCCATACATAACGGGATTCCGTGGGTTTTGACGGTTGGAGCGAGCAACACAGAGCGTTCTCTTGGCGGCACGTTAATTCTGGGAAACGGGAAGAGGTTTTCGGGGTGGACTCTGTTCCCTGCAAGTGCCACCGTAAGTAACCTTCCTCTCGTTTACCACAACAACGTTTCCGCGTGTGACTCTTCTGAACTCTTGTCCCAACTCGCACGTGGCAGCATCGTCATATGCGATTCTGTTATGGATGTTAACCAACAGATTCAGCGCGTGTCATTGTCTCAAGTGTATGGAGCTGTGTTTGTATCCGCTGATCCCACTGTGTTTGAAATCGGAAAAATGACGTGTCCTGGTCTTCTGATTAGCCCTCACGACGGGGACAAGGTGATCGAGTATGCACGCGCAACCCCACTCGCCTTCGCCACTATAAAGTTTCAAGAAACCTACGTGGGAACGAAACCGGCTCCCACGGTGGCCAGTTACAGTTCTAGAGGCCCATCTCGGGAGTGTCCGTGGGTATTGAAGCCCGACGTTATGGCTCCCGGGTCGTCGATTTTGGCGGCTTGGGTTCCGGATTTACCAGCGGCCCAAATTGGCCCAAATGTGCTGTTGAATAATGAATACAATTTGTTGTCGGGGACATCGATGGCTTGTCCCCATGCTTCCGGGGTGGTGGCTCTGTTGAGGAATGCACACCCCGAGTGGACTGCTTCGGCTGTTAGGTCTGCGTTGACTACGACGGCCAGCCCATTGGATAACACTGGAAAGCCCATTAAAGAAAATGGAGAGCTCCCTCAACGGGCTTCACCTCTCGCCATGGGGGCTGGCCTGATTGACCCCAACCGGGCCCTTGACCCAGGTTTGATTTATGATGCCACCCCTCAAGACTACGTTAACCTCCTATGTGCGATGAATTTCACCCAGGCCCAAATCTTGACAATTACCAGATCAAAAGCCTACAATTGCTCAAGCCCATCTTATGACCTCAATTATCCCTCCTTCGTGGCTTTTTATGTTAACGAGAGTGTGACAGTGGAGAGAAAATTCCGGCGAAGTGTGACTTACGTTGGAGATGGTCCAGCTGCTTACACGGCACGTGTGAACTCCTCAAATGACACAAAAATCTCAGTATCTCCCAATAGGTTGGTCTTCAAAGGAAAATATGAGAAACGCAATTTCTGTTTGACATTGAAGTCTGAAATGAAGAAGGAAAATGTTGTGGCTTTCGCTGCATTGGAATGGGTTGAAGAAACAGGACGGCACGTTGTTAGGAGTCCCCTTGTGGTCGTACCTATGAACGTTCCCTTCAACCCCTGA 2142 0.5131 MSLLCLCNSKAVTYIVHMNKSCMPKVFTSQLHWYSSTVTSLDSATPPANPTILYSYENALHGFSVALSPHQLEALKQTPGFISAYRDRATTLDTTHSYRFLSLNTSHGLWPVSNYGQNVVVGVVDSGIWPESDSFMTMAWYFNKGVLAAHDGDDLTKVGANSVRDSNGHGTHTASTVAGNYVKGASYFGYAKGTARGIAPRAKIAMYKVAWAQGVFTSDMLAGLDQAIADGVDVISISMGLDMVPLYEDPVAIAAFSALEKGIVVSASAGNAGPSLWSIHNGIPWVLTVGASNTERSLGGTLILGNGKRFSGWTLFPASATVSNLPLVYHNNVSACDSSELLSQLARGSIVICDSVMDVNQQIQRVSLSQVYGAVFVSADPTVFEIGKMTCPGLLISPHDGDKVIEYARATPLAFATIKFQETYVGTKPAPTVASYSSRGPSRECPWVLKPDVMAPGSSILAAWVPDLPAAQIGPNVLLNNEYNLLSGTSMACPHASGVVALLRNAHPEWTASAVRSALTTTASPLDNTGKPIKENGELPQRASPLAMGAGLIDPNRALDPGLIYDATPQDYVNLLCAMNFTQAQILTITRSKAYNCSSPSYDLNYPSFVAFYVNESVTVERKFRRSVTYVGDGPAAYTARVNSSNDTKISVSPNRLVFKGKYEKRNFCLTLKSEMKKENVVAFAALEWVEETGRHVVRSPLVVVPMNVPFNP 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00533 713 Gene3D Peptidase S8/S53 domain 118 572 IPR036852 GO:0004252|GO:0006508
Spst6g00533 713 PRINTS Subtilisin serine protease family (S8) signature 116 135 IPR015500 -
Spst6g00533 713 PRINTS Subtilisin serine protease family (S8) signature 487 503 IPR015500 -
Spst6g00533 713 PRINTS Subtilisin serine protease family (S8) signature 165 178 IPR015500 -
Spst6g00533 713 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 7 93 IPR037045 -
Spst6g00533 713 Gene3D - 295 425 - -
Spst6g00533 713 Pfam Fibronectin type-III domain 603 704 IPR041469 -
Spst6g00533 713 CDD PA_subtilisin_like 301 418 - -
Spst6g00533 713 SUPERFAMILY Subtilisin-like 93 563 IPR036852 GO:0004252|GO:0006508
Spst6g00533 713 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 14 704 IPR045051 -
Spst6g00533 713 FunFam Subtilisin-like protease SBT1.9 4 93 - -
Spst6g00533 713 ProSitePatterns Serine proteases, subtilase family, serine active site. 488 498 IPR023828 -
Spst6g00533 713 Pfam Peptidase inhibitor I9 13 91 IPR010259 -
Spst6g00533 713 ProSiteProfiles Serine proteases, subtilase domain profile. 97 559 - -
Spst6g00533 713 CDD Peptidases_S8_3 91 524 IPR034197 -
Spst6g00533 713 Gene3D - 576 706 - -
Spst6g00533 713 Pfam Subtilase family 116 528 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00533 Spst-Chr6 4917027 4919260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00533 3 692 Subtilisin-like Serine Gene Family AT5G67090 38.063 6.85e-167 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00533 - - ccaj:109796640 1125.92