Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00531 ATGAGTTGTTTTCCGTGTTTTTCAAAGAGTAAGAAAAGCAATAGCAAGAAGGAGCAGCAAGTGCCTTCACCAGAGGAAGAAGATATAGCAACAAAAACACCTCCGGAGGTAAAGAAACCAAAGGCAGATGAACCAAACCAGGTTGACACTTCAAATATTCAAGCACAAAATTTCACATTCCGTGAACTGGCAATCGCGACGAAGAACTTTCGGCAAGAATGCTTGATGGGTGAAGGGGGCTTTGGCAGAGTTTACAAGGGAACAATTCCTGCAACTGGGCAGGTGGTAGCAGTGAAGCAACTCGACCGAAATGGGGGGCTAGCAAGTAAGGATTTTCTGGTGGAGGTTTTGATGTTAAGTCTCTTGAACCATGAGAACCTCGTCAAACTCACTGGTTATTGTGCTGACGGAGATCAACGCCTTTTGGTGTATGAGTTGATGCCAGGTGGCTCTTTAGAAGGGCTTCTTCTTGTTGGTTTTGGTAAAAAGGCTGGTAAAACCAAAGTAAAACATGTGCTTGGTTTTATAACAGATAGGAAAGCAGATGAACCTCCTTTAGATTGGCACAACAGAATGAAAATAGCATCACATGCGGCGAAAGGACTATGGTACTTGCACGACAAGGCCAACCCTTCAGTTATATACCGGGACATGAAATCTTCGAACATCTTGCTGGATAATGATTTCAATGCAAAACTATCAGATTATGGATTGGCCAAACTTGCTGGTGATAAGATGAATATTGTACCCACGAGAGTTATGGGCACCTACGGTTACAGTGCTCCCGAGTACGTAAGAACAGGTAACCTCACCTTGAAATCAGATGTCTACAGTTTTGGAGTCGTCTTGCTTGAGCTCATATCTGGACGGCGTGCGGTTGACACCACAAGATCGGGCGATGAGCAAAATCTAGTTTCATGGGCACAACCCATATTCAGAGACCCAAAGAGATATCCAGATTTAGCAGATCCAAATCTGGGGAAAAATTTCCCAGAAAAGGATCTGAACCAAGTTGTTGCCATTGCAGCCATGTGCTTGCAGGAGGAAGCAGCAGCCCGTCCTTTGATGAGTGATGTTGTAACTGCTCTCAGTTTTCTTTCCACCAGTCCTTCAGAGGTTGCTCCCGGTGCTGCTGAAAATGACAGCCGCAGCTCCTCCGGTAGTTCTTCTGGCGAGGACAATGGATCTGCTAATAACCAGACTGAAAAACAACATGATTACAGTCCCCAATTCACTAAAGAGACGAAGGAGTTCTACTCCAAATCGAGCCGCAAGAGCAGCACCAGCTCCACTTCAGATTCAGAACATGGACGCGTCTCAACCGGCCGCAAAAGCAGTAGGAAAAGTAGCAAAAAGAAATCTTCCTTAAACCAGAAGAGTAGTAAGAAATCTTCTCTGAAGCAAAAGAGCATCAAGAAATCTTCTGTCAACATCTTAAGCAGCAAGAAAAGTCGTTCATCCAATTCAAGCACCAGTGGGGCGTCACAACATGATGGTGGCGATGTTTTTGAGCGTAGCGGAAGCAGGCCATCAGAAGGGAACGTTTCAATTGGCCTAATCAGAAGTGAGAATATTCACTACTCAGACAATGACAGTAGCATAAGGTCCGAGGAAAGAAGTAGCATGCATTAG 1632 0.4491 MSCFPCFSKSKKSNSKKEQQVPSPEEEDIATKTPPEVKKPKADEPNQVDTSNIQAQNFTFRELAIATKNFRQECLMGEGGFGRVYKGTIPATGQVVAVKQLDRNGGLASKDFLVEVLMLSLLNHENLVKLTGYCADGDQRLLVYELMPGGSLEGLLLVGFGKKAGKTKVKHVLGFITDRKADEPPLDWHNRMKIASHAAKGLWYLHDKANPSVIYRDMKSSNILLDNDFNAKLSDYGLAKLAGDKMNIVPTRVMGTYGYSAPEYVRTGNLTLKSDVYSFGVVLLELISGRRAVDTTRSGDEQNLVSWAQPIFRDPKRYPDLADPNLGKNFPEKDLNQVVAIAAMCLQEEAAARPLMSDVVTALSFLSTSPSEVAPGAAENDSRSSSGSSSGEDNGSANNQTEKQHDYSPQFTKETKEFYSKSSRKSSTSSTSDSEHGRVSTGRKSSRKSSKKKSSLNQKSSKKSSLKQKSIKKSSVNILSSKKSRSSNSSTSGASQHDGGDVFERSGSRPSEGNVSIGLIRSENIHYSDNDSSIRSEERSSMH 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00531 543 PANTHER OS07G0668900 PROTEIN 3 373 - -
Spst6g00531 543 FunFam Serine/threonine-protein kinase PBS1 170 382 - -
Spst6g00531 543 MobiDBLite consensus disorder prediction 11 45 - -
Spst6g00531 543 SUPERFAMILY Protein kinase-like (PK-like) 49 366 IPR011009 -
Spst6g00531 543 MobiDBLite consensus disorder prediction 528 543 - -
Spst6g00531 543 MobiDBLite consensus disorder prediction 370 406 - -
Spst6g00531 543 FunFam probable serine/threonine-protein kinase RLCKVII 42 146 - -
Spst6g00531 543 Pfam Protein kinase domain 72 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00531 543 MobiDBLite consensus disorder prediction 1 51 - -
Spst6g00531 543 Gene3D Transferase(Phosphotransferase) domain 1 171 369 - -
Spst6g00531 543 MobiDBLite consensus disorder prediction 509 527 - -
Spst6g00531 543 MobiDBLite consensus disorder prediction 370 543 - -
Spst6g00531 543 Gene3D Phosphorylase Kinase; domain 1 31 146 - -
Spst6g00531 543 CDD STKc_IRAK 76 363 - -
Spst6g00531 543 MobiDBLite consensus disorder prediction 459 497 - -
Spst6g00531 543 MobiDBLite consensus disorder prediction 443 458 - -
Spst6g00531 543 ProSiteProfiles Protein kinase domain profile. 70 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00531 543 MobiDBLite consensus disorder prediction 422 436 - -
Spst6g00531 543 MobiDBLite consensus disorder prediction 407 421 - -
Spst6g00531 543 ProSitePatterns Serine/Threonine protein kinases active-site signature. 213 225 IPR008271 GO:0004672|GO:0006468
Spst6g00531 543 SMART serkin_6 70 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00531 Spst-Chr6 4893226 4895742 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00531 1 397 Glycoside Hydrolase AT3G07070 58.394 5.20e-157 452
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Spst6g00531 Pkinase 1.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00531 - - gmx:100807682 675.241