Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00521 ATGGAATCAAAGAAGAGCGAAGGAGAGAGTTCGAGGTCGAGAATTTCAGCACTGGTTGTGGACGACGACGCTATCATTCGGAAAATCCACAAGGCGATGTTGCAGCAGGTATTCAACATGGACGCAAAATCTGTCAAGGATGGAAAGGAAGCAGTGGATCTGCATCGTTGTGGCGCAAATTTTGACATAATTTTCATGGACAAAGAAATGCCAATCATGGATGGTCATGAGGCCACAAAAGAGCTACGTGGTATGGGTGTGAAGAGCATGATTGTGGGAATCACTACGCGTGCTGATGAGAAAGATAGAGAAGAGTTTCTAGCTGCAGGATCCAACCATTGCTTTGAAAAGCCTCTGAATCGTGCCAAGGTTGAACAAGTCTTGCACGACCATCCAAATTTTCCATTTTGA 411 0.4501 MESKKSEGESSRSRISALVVDDDAIIRKIHKAMLQQVFNMDAKSVKDGKEAVDLHRCGANFDIIFMDKEMPIMDGHEATKELRGMGVKSMIVGITTRADEKDREEFLAAGSNHCFEKPLNRAKVEQVLHDHPNFPF 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00521 136 SUPERFAMILY CheY-like 14 131 IPR011006 -
Spst6g00521 136 Pfam Response regulator receiver domain 18 127 IPR001789 GO:0000160
Spst6g00521 136 SMART REC_2 15 128 IPR001789 GO:0000160
Spst6g00521 136 Gene3D - 1 132 - -
Spst6g00521 136 ProSiteProfiles Response regulatory domain profile. 16 132 IPR001789 GO:0000160
Spst6g00521 136 PANTHER TWO-COMPONENT RESPONSE REGULATOR 7 130 - -
Spst6g00521 136 CDD REC_hyHK_CKI1_RcsC-like 18 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00521 Spst-Chr6 4815850 4816351 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00521 9 124 Response Regulator Gene Family AT3G04280 49.153 2.51e-33 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Spst6g00521 Response_reg 1.1e-20 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00521 - - pvu:PHAVU_006G107500g 216.853
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00521 6 4815850 4816351 Spst6g00521 6 4815850 4816351 ECH