Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00503 ATGGAATGTGTTTTGGATGGGGGCAAGCAGCAACAACGATATTCAGACCTGCATGTACTGACCAATATTGGGACCATTATCTTGGAAGTTTTGTCGCTGGACCAATGTCCTTGTAAAACCCGCCCTCCCCTTCCATTTAAGACTAGGAATTTGCTCAAAACGAAACAGAAAATGCAGCGAGAAGAAGCAGGAGCCCACAAGAAACAACAATACCAAGTGTTGGAAGAAATCGGTCGAGGCAAATTCGGCACTGTCTTCCGCTGCTTCCACCCTTCATCCAACCAATTCTACGCTCTCAAACTCATCCACAACCGCCTCCTCACCGACGCCGCCGACCGCCACTGCCTCGAAATCGAGGCCAAGGCCATGATCTTCCTCTCTCCCCACCCCAACATTCTCAAAATCATCGACGCCTTCCAAGACGGCGAAACCTCCACCATAGTTCTCCAACTCTGCCAGCCCCGCACTCTCTTCGACCGCATCGCCGACGGACCCTTGCTGGAGCCCCACGCCGCCTCCCTCATTAAGCAGCTTCTCGAAGCCCTCACGCACTGCCACGCCCTCGCCCTCGCCCACAGAGACATCAAACCCGAAAACCTCTTGTTCGACGACGGCAACAACCTTAAACTCTCCGACTTCGGCTCCGCGGAGTGGTTCGGTGAGGGCAGACCCATGAGCGGCGTGGTGGGCTCCCCCTATTACGTGGCGCCGGAAGTTCTCATGGGGAGAGAGTACGACGAGAAAGTAGATGTTTGGAGCAGTGGGGTGATTCTGTACGCAATGTTAAGTGGGTTTCCACCCTTTTATGGAGACTCTGCTGCACAAATTTTTGAAGCTGTTTTAAGGGCCAATCTTAGGTTTCCCACCACCATTTTTAGGTCTGTTTCTGCTCCTGCAAAGGATCTTCTCAGGAAGATGATTTGTAGGGATCCCTCTAGGCGTATATCTGCACACCAAGCTTTGAGACACCCATGGATTTTGAGTGGGGGTGTGAAGAGTGGTGATCTATCTTGA 1014 0.5237 MECVLDGGKQQQRYSDLHVLTNIGTIILEVLSLDQCPCKTRPPLPFKTRNLLKTKQKMQREEAGAHKKQQYQVLEEIGRGKFGTVFRCFHPSSNQFYALKLIHNRLLTDAADRHCLEIEAKAMIFLSPHPNILKIIDAFQDGETSTIVLQLCQPRTLFDRIADGPLLEPHAASLIKQLLEALTHCHALALAHRDIKPENLLFDDGNNLKLSDFGSAEWFGEGRPMSGVVGSPYYVAPEVLMGREYDEKVDVWSSGVILYAMLSGFPPFYGDSAAQIFEAVLRANLRFPTTIFRSVSAPAKDLLRKMICRDPSRRISAHQALRHPWILSGGVKSGDLS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00503 337 PANTHER SERINE/THREONINE-PROTEIN KINASE 54 329 - -
Spst6g00503 337 Gene3D Transferase(Phosphotransferase) domain 1 155 333 - -
Spst6g00503 337 FunFam Maternal embryonic leucine zipper kinase 65 332 - -
Spst6g00503 337 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Spst6g00503 337 SUPERFAMILY Protein kinase-like (PK-like) 64 328 IPR011009 -
Spst6g00503 337 ProSitePatterns Protein kinases ATP-binding region signature. 77 100 IPR017441 GO:0005524
Spst6g00503 337 ProSiteProfiles Protein kinase domain profile. 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00503 337 CDD STKc_CAMK 70 325 - -
Spst6g00503 337 Gene3D Phosphorylase Kinase; domain 1 46 153 - -
Spst6g00503 337 Pfam Protein kinase domain 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00503 337 SMART serkin_6 71 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00503 Spst-Chr6 4603884 4607048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00503 71 333 EF-hand Containing Proteins AT1G50700 40.824 2.65e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Spst6g00503 Pkinase 2.2e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00503 - K08794 gmx:547573 422.165