Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00482 ATGTTTAGCTGTGACTGTTTTTCGTGGAACAGTGTTCCTGAATCCTACCCTTCTGAGCCAGAGCCCTTCTCTCTGCCAGCACCTCTTCCACAATGGCCACAAGGTACTGGTTTTGCTAGAGAAAGAATAAGCCTTGGAAGCATAGAAGTTTTCAAAATAAGGAGGTTTGAAAGAGTTTGGAGCAGCCCAAGTTCGCATGGTAAATCTCACGATTTCGTATTTTACAAACCGTTGGAGATTCCAGTTGATTTTTTCTGCCTTGGTTACTATTGTCAGTCCAATGATCAGCCATTGAGAGGACATGTTCTTGTGGCTCGTGAAACTTCTTCTGAACCTGAAGCTGAATCTCCAGCTCTTAAAAAACCAATTAACTACTCTTTGATATGGACCGCTGATTCACCACATGATGGATGTGGTTATTTTTGGTTGCCAAATCCTCCATTGGGATACAAAGCAATGGGCATAGTGGTTACTAACAAACCAGATGAACCTGAAGTTGAAAAAGTTAGATGTGTAAGAGCCGATCTGACAGAAACTTGCGAGACTTGTGATCTATTACTATCTATGAACTCCAAGTTTTCCAAAATTTCATTCAAGGTTTGGAACACTAGGCCTTGTAAAAGAGGGATGTGGAGTAGAGGTGTATCAGTTGGAACATTCTTCTGCAGCACCTATTCTAACTATGAACAAGTGGCAGATATTGCTTGCTTGAAGAATCTTGACTCCACCTTACAAGCCATGCCAAACATAGACCAAGTTCATGCACTCATTAATCATTATGGCCCCACTGTGTACTTCCACCCTGATGAGAAATACTTGCCATCATCAGTGCAATGGTTTTTCAAAAGCGGAGCACTTGTGTATTCAAGAGACAATGAGAAGGGTAAAGCAATAGATTACCAAGGATCAAACTTACCAAGTGGGGGAACAAATGATGGAGCTTTTTGGATAGATTTGCCTACTGATAATGATGCTAGAAATAATGTAAAGAAGGGAGACATAGAGAGTGCAGAACTCTATGTTCATGTAAAACCAGCTTTGGGAGGAACATTTACTGATATTGCCATGTGGGTATTTTGTCCCTTCAATGGACCTGGCATACTTCAAGTGGGGTTTGTGAACATTAAGCTCAACAAGATAGGTGAACACGTGGGTGACTGGGAACACTTCACCCTTCGTGTGAGCAACTTCACAGGAGAACTATGGTCTGTGTTCTTTTCTCAGCACAGTGGAGGAGAGTGGGTGAATGCATTCAACTTGGAGTATATTGAAGGAAATAAACCAATTGTTTATTCATCAAGGCATGGCCATGCAAGTTTTCCTCATCCTGGGACCTACCTTCAGGGAGCATCCAAACTTGGAATAGGAGCAAGGAATGAAACAGCTAGAAGTAAACTCAAGGTAGATTCCAGCAGCAGGTACAAGGTTGTTGCGGCTGAGTATCTTGGTAAGGGAGCAATTGCAGAACCAAGTTGGTTGCAGTATATGAGAGAATGGGGTCCTACTATTGTGTATGACTCACGTTCTGAAATAGAAAAGTTGATAGATTTGCTTCCGGTGTTTCTTAGATTGTCTTTGGTGATTTTGTTTGAATTGTTTCCCACGGAGCTTTATGGTGAGGAGGGGCCAACTGGTCCAAAGGGAAAGGCCAATTGGTTAGGAGATGAAAAGAACCTCCGTCCTCTCTCAGTCGGCGATATTAGGACTCACTCTCACTCTCAGTTTCTTCTTCCTCTATCCATCCAGGTTTTCACTGAATGCTTCAGTTCTACTATTTCTGATTTATTGTCCTACGCAACAATGGACTGGGCGTTTGTGCATAAAACGTGGGATAAGTGGGCTTCTACCAACATTGGTTATTCTGGTCATCCGTTAAAAGCTGCTTTGCTAATTAATTATGACCCGACTGGACCATCCCGATTATTATCTACCATTGCTGCACAAGAAGGAATAAAAACTAATCCCATTGAATTGAGTCACTTTGTGGACTTTATCAAACAAAATAAACTCCAGACAGAGCTCTTCACTATTGGATCTAATCAGTACTTGGTCACGTCAATTCATGAGAACTGGTTTAGTGCAAGGTGTATAAACACGTCAAAGCCTGCTGGTGAAGGTGTTATTGTTATACAAACATCAGCATATATCTTGGTTGCTCTGTACGAAGGTTCCATTGGTCCAGCATCTCGTGCGATGGCAGCTGCTGATCAGTTAACTTGGCAATTAGGGCGAAAAAATCTTTAA 2244 0.4193 MFSCDCFSWNSVPESYPSEPEPFSLPAPLPQWPQGTGFARERISLGSIEVFKIRRFERVWSSPSSHGKSHDFVFYKPLEIPVDFFCLGYYCQSNDQPLRGHVLVARETSSEPEAESPALKKPINYSLIWTADSPHDGCGYFWLPNPPLGYKAMGIVVTNKPDEPEVEKVRCVRADLTETCETCDLLLSMNSKFSKISFKVWNTRPCKRGMWSRGVSVGTFFCSTYSNYEQVADIACLKNLDSTLQAMPNIDQVHALINHYGPTVYFHPDEKYLPSSVQWFFKSGALVYSRDNEKGKAIDYQGSNLPSGGTNDGAFWIDLPTDNDARNNVKKGDIESAELYVHVKPALGGTFTDIAMWVFCPFNGPGILQVGFVNIKLNKIGEHVGDWEHFTLRVSNFTGELWSVFFSQHSGGEWVNAFNLEYIEGNKPIVYSSRHGHASFPHPGTYLQGASKLGIGARNETARSKLKVDSSSRYKVVAAEYLGKGAIAEPSWLQYMREWGPTIVYDSRSEIEKLIDLLPVFLRLSLVILFELFPTELYGEEGPTGPKGKANWLGDEKNLRPLSVGDIRTHSHSQFLLPLSIQVFTECFSSTISDLLSYATMDWAFVHKTWDKWASTNIGYSGHPLKAALLINYDPTGPSRLLSTIAAQEGIKTNPIELSHFVDFIKQNKLQTELFTIGSNQYLVTSIHENWFSARCINTSKPAGEGVIVIQTSAYILVALYEGSIGPASRAMAAADQLTWQLGRKNL 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00482 747 SUPERFAMILY Profilin (actin-binding protein) 610 740 IPR036140 -
Spst6g00482 747 Gene3D Dynein light chain 2a, cytoplasmic 609 746 - -
Spst6g00482 747 Pfam Profilin 609 742 IPR005455 GO:0003779
Spst6g00482 747 PANTHER BNAC01G40110D PROTEIN 1 557 - -
Spst6g00482 747 Pfam Vacuolar protein sorting-associated protein 62 20 556 IPR009291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00482 Spst-Chr6 4419617 4426075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00482 600 747 Carbohydrate Esterase AT4G19410 67.785 6.04e-63 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00482 - - gmx:100814522 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00482 6 4419617 4426075 Spst6g00482 6 4419617 4426075 ECH