Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00466 ATGCATTCACGTGGAAAAGGTCCCTTGCTTTCTCTTGTTTGTGTCCTTCTGTTGAATGGCATTCATGGTGCACTTAGTGAGGAGCCAGAGTCTTTGATCTTGGGTTCTGGATTGGATGAGGTTGCCGAAGATGGTGATGGAAGAAAATGGAGTCCTGATAAAAAGTTCTTGGAGACAAAAGGTGATTCAATCACAGCCAAAGCATCTTACCAAGACCCTTCTCTTATGTCCCAGATACCATACATGTCAGCACGTGTTTTCAAATCTGAGTCAACATACAAATTCCCCATTAAATCTGATAAGCGTTATTGGCTCAGGCTTCATTTTTACCCCTCTCTTTATGACACTTTCGATCCCACTAACTCATATTTCTCCGTGACTGCAAATGGTGTTACCCTCCTCACCAATTTCAGCGCCTCAGTCACTTGTGAGGCCCTCTCACTAGCATACATAGATAGAGAGTATTCCCTTGCTCCTTTGAATTCAGATTCCTTGACTCTCACTTTCCAGCCTTCTGATAAATACGACGGTGCATTCGCTTTTGTCAATGGCATTCAGCTTATCGAAATGCCCGATTTGTTTGATTCTGCATCATTGATAGGGTATGATGACCAAACCATAGATGTAAAAACATTGAATTTGCAAACCATGTTTAGATTAAACGTTGGAGGGCAGTTCATATCTCCAATCCATGACTCTGGACTTACAAGGATATGGTATGATGACACACCTTACCTTTATGGGTCAGCCAGTGGTGTGACCAACAAAGCTGAGAAGAATGTCACAATCAACTATCAAACCATGCCAGAGCATATTGCTCCTCATGATGTCTACTCCACATCCAGATCAATGGGGGGAGATCCAAATATCAACATGGGCTACAATCTCACTTGGAGCTTCCGTGTTGATCCCAGTTCCATGTACCTTGTAAGGTTACATTTCTGTGATTACCACTACTCCAAGATCAATCAGATTGTCTTCAATATCTTTGTCAACAACCAAACGGCACAAGCTCAAGCTGATGTGATTGGGTGGACAGGAGGCATAGGAGTGCCAATTTATAAGGACTACGTTATACATGTCGAAGATGGAAAGAGTAATGAGTTGCTCTGGCTTGCTCTCCACCCCGACCCAGACACACGGCCTGAGTTCTATGATGCCATACTCAATGGAGTGGAGATATTCAAGCTCAACGACACAGACTTATCTGCTCCCAATCCTCTGATTTCAGACATGCTTCTCAGAGAGCACCGGGAGGAGGAAGCGGGTTTCTTTACCCACAAATCTAGTCATCGTTCTGTGATCGGTGGAGCTGCTGGAGGTGCGGCTGGTTTTGCTTTTATGGCTGTAGTATGTGTTGCTATGTACAACAAGAAGAAGAGAGAACCAGGATCAGATGGTCAAACAGGCTGGCTACCCATCTATTCACGCTCTAGCAAATGCAGCAAGTCTGGCAGGAGCATGTGCAGTACCACCTTATCCGCCATGTCTCAAGGTCTTTGCCGCTATTTCACCTTGCAAGAGATAAAGCAAGCAACCGACAATTTTGATGAATCCAACGTCATTGGGGTTGGTGGATTTGGAAAGGTGTACAAAGGTGTCATTGATAATGGAACGAAGGTGGCAATCAAGAGGTCCAATCCCCAGTCAGAACAAGGAGTTGACGAATTCCAAACGGAAATTGAGATGCTTTCCAAGCTGAGACACAAGCATTTGGTGTCCTTGATTGGTTTCTGCGAGGAAAATGATGAGATGTGCCTGGTTTATGACTACATGGCTCTTGGCACCATGAGGGAGCATCTTTACAAGGGCAACAAACCTATGTCTACTCTATCATGGAAGCAAAGATTGGAGATTTGCATTGGAGCTGCAAAAGGGCTTCACTACCTTCACACCGGGGCAAAGTACACAATCATTCATAGAGATGTCAAAACAACTAACATTCTCTTGGATGAAAACTGGAATGCCAAGGTTTCAGATTTTGGCTTGTCAAAAACGGGTCCAAATATGGACCAAGGTCATGTTAGCACCGTGGTGAAGGGTAGCTTTGGCTACTTGGATCCTGAATACTTCAGGAGGCAACAATTGACTGAAAAATCTGATGTCTACTCATTTGGGGTTGTTCTGTTTGAAGCCCTATGTGCCAGGCCTGTCCTCATTCCTAACCTTCCAAAGGAACAGGTTAGTCTTGCTGAATGGGCATTGATTTGCAAGAAAAAAGGAACTCTAGAGGATATCATTGACCCTTGTCTCAAGGGAAATATCAATGAAGAAAGCTTGAACAAGTTTGTGGACACGGCAGAGAAGTGCTTGTCTGATCATGGTACTGATCGGCCCTCCATGAATGATCTATTGTGGAATCTTGAATTTGCTCTCAACCTGCAAGAAAATGTTAATGGTGAAGGTGGTTCAACTCAATCTGCTCAAGCGGAGAAAAGTGAGTTCGAAGATATAAGCTTGGAAAATGACATAGCACGCCACTATAGAAACTTGAGCCTTGGAAGTGACATTGACATTAACGACAATTCCACTGAGAATCAGGATGCCATCTTCTCACAAATTGTCAGTCCAAAAGGACGATGA 2583 0.439 MHSRGKGPLLSLVCVLLLNGIHGALSEEPESLILGSGLDEVAEDGDGRKWSPDKKFLETKGDSITAKASYQDPSLMSQIPYMSARVFKSESTYKFPIKSDKRYWLRLHFYPSLYDTFDPTNSYFSVTANGVTLLTNFSASVTCEALSLAYIDREYSLAPLNSDSLTLTFQPSDKYDGAFAFVNGIQLIEMPDLFDSASLIGYDDQTIDVKTLNLQTMFRLNVGGQFISPIHDSGLTRIWYDDTPYLYGSASGVTNKAEKNVTINYQTMPEHIAPHDVYSTSRSMGGDPNINMGYNLTWSFRVDPSSMYLVRLHFCDYHYSKINQIVFNIFVNNQTAQAQADVIGWTGGIGVPIYKDYVIHVEDGKSNELLWLALHPDPDTRPEFYDAILNGVEIFKLNDTDLSAPNPLISDMLLREHREEEAGFFTHKSSHRSVIGGAAGGAAGFAFMAVVCVAMYNKKKREPGSDGQTGWLPIYSRSSKCSKSGRSMCSTTLSAMSQGLCRYFTLQEIKQATDNFDESNVIGVGGFGKVYKGVIDNGTKVAIKRSNPQSEQGVDEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDYMALGTMREHLYKGNKPMSTLSWKQRLEICIGAAKGLHYLHTGAKYTIIHRDVKTTNILLDENWNAKVSDFGLSKTGPNMDQGHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEALCARPVLIPNLPKEQVSLAEWALICKKKGTLEDIIDPCLKGNINEESLNKFVDTAEKCLSDHGTDRPSMNDLLWNLEFALNLQENVNGEGGSTQSAQAEKSEFEDISLENDIARHYRNLSLGSDIDINDNSTENQDAIFSQIVSPKGR 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00466 860 Gene3D Phosphorylase Kinase; domain 1 476 591 - -
Spst6g00466 860 CDD STKc_IRAK 522 789 - -
Spst6g00466 860 FunFam Receptor-like protein kinase FERONIA 592 809 - -
Spst6g00466 860 SUPERFAMILY Protein kinase-like (PK-like) 490 791 IPR011009 -
Spst6g00466 860 ProSitePatterns Protein kinases ATP-binding region signature. 522 544 IPR017441 GO:0005524
Spst6g00466 860 PANTHER OS07G0166700 PROTEIN 500 795 IPR045272 GO:0004714|GO:0006468
Spst6g00466 860 ProSitePatterns Serine/Threonine protein kinases active-site signature. 638 650 IPR008271 GO:0004672|GO:0006468
Spst6g00466 860 FunFam receptor-like protein kinase FERONIA 478 591 - -
Spst6g00466 860 SMART serkin_6 516 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00466 860 FunFam FERONIA receptor-like kinase 212 398 - -
Spst6g00466 860 Gene3D Transferase(Phosphotransferase) domain 1 592 812 - -
Spst6g00466 860 Pfam Malectin-like domain 43 396 IPR024788 -
Spst6g00466 860 Pfam Protein tyrosine and serine/threonine kinase 520 785 IPR001245 GO:0004672|GO:0006468
Spst6g00466 860 FunFam FERONIA receptor-like kinase 31 191 - -
Spst6g00466 860 Gene3D - 212 397 - -
Spst6g00466 860 Gene3D - 35 191 - -
Spst6g00466 860 ProSiteProfiles Protein kinase domain profile. 516 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00466 Spst-Chr6 4300952 4303534 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00466 44 860 Receptor kinase-like Gene Family AT3G51550 53.810 0.0 843
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Spst6g00466 Malectin_like 1.8e-35 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00466 - - gmx:102659961 1368.21