Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00463 ATGAATTTTCCGAACGCTGATACTGATGATGGTATTACTCCACTCCTTTCAGCTGTGGCAGCCGGTTCTCTGGCATGTTTAGAGATATTAATTCAGGCAGGTGCTAATGTAAATATAAGTGCTGGTGGAGCAACTCCTTTGCACATTGCAGCTGATAATGGAAGTCTTGAACTAATAAATTGCTTATTGAAAGCTGGAGCTGATCCTAATTTCTCTGATGAGGATGGTATCAAGCCAATACAGGTTGCTGCTGCAAGGGGCTATGTAGGTGCTGTTGAGATATTGTTCCCTTTGACTTCCAAAGTAGATATCTTTCCAACTTGGACTATTGATGGGGTACTTGAGTATATGCAATCTGAAACTAGCAAGCAACAGGTACTGAAATCTTAA 390 0.4103 MNFPNADTDDGITPLLSAVAAGSLACLEILIQAGANVNISAGGATPLHIAADNGSLELINCLLKAGADPNFSDEDGIKPIQVAAARGYVGAVEILFPLTSKVDIFPTWTIDGVLEYMQSETSKQQVLKS 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00463 129 Gene3D - 1 99 IPR036770 -
Spst6g00463 129 ProSiteProfiles Ankyrin repeat region circular profile. 10 39 - -
Spst6g00463 129 ProSiteProfiles Ankyrin repeat profile. 10 42 IPR002110 GO:0005515
Spst6g00463 129 SUPERFAMILY Ankyrin repeat 4 104 IPR036770 -
Spst6g00463 129 Pfam Ankyrin repeats (3 copies) 6 73 IPR002110 GO:0005515
Spst6g00463 129 ProSiteProfiles Ankyrin repeat region circular profile. 42 74 - -
Spst6g00463 129 SMART ANK_2a 10 39 IPR002110 GO:0005515
Spst6g00463 129 SMART ANK_2a 42 71 IPR002110 GO:0005515
Spst6g00463 129 SMART ANK_2a 75 104 IPR002110 GO:0005515
Spst6g00463 129 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 5 126 - -
Spst6g00463 129 ProSiteProfiles Ankyrin repeat profile. 42 74 IPR002110 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00463 27 103 Ion Channels AT2G26650 38.462 1.50e-08 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00463 - - pvu:PHAVU_006G1024002 222.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00463 6 4273103 4274920 Spst6g00463 6 4273103 4274920 ECH