Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00462 ATGCCAAAGAAACTAATCAGTCCAAGGATGTCTGTTTCTCCCGAGCAAAAAATTCTTGAGGTGACTCCAGAAGCCAAAAAGAGAGCAGCAGAAGCAAAGTCAAGAGGGGATGAGGCATTTAAAGGGAAAGACTATCATATGGCTATGGATTCGTATACACAAGCAATTGATCTGGATCCGACTGATGCTACTTTGCTATCTAATAGAAGTCTCTGTTGGATTAGGTTGGGCCAAGCTGAGCATGCTTTATCTGATGCAAAGGCCTGTAGAGCTTTAAGACCTGATTGGCCAAAAGCATGTTATAGGGAAGGTGCAGCTCTGCGTGTGTTGCAGAAATTTGATGAAGCTGCAAATGCATTTTATGAGGGAGTAAAACTTGATCCCGAAAATAAGGAGCTTGTAAATGCGTTCAGGTCTGCATACTATTTTATTTATCAACACTTCTTGGCATATTGA 456 0.4145 MPKKLISPRMSVSPEQKILEVTPEAKKRAAEAKSRGDEAFKGKDYHMAMDSYTQAIDLDPTDATLLSNRSLCWIRLGQAEHALSDAKACRALRPDWPKACYREGAALRVLQKFDEAANAFYEGVKLDPENKELVNAFRSAYYFIYQHFLAY 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00462 151 MobiDBLite consensus disorder prediction 1 37 - -
Spst6g00462 151 MobiDBLite consensus disorder prediction 20 37 - -
Spst6g00462 151 Pfam Tetratricopeptide repeat 36 62 IPR019734 GO:0005515
Spst6g00462 151 Pfam Tetratricopeptide repeat 98 130 IPR019734 GO:0005515
Spst6g00462 151 SUPERFAMILY TPR-like 28 140 IPR011990 GO:0005515
Spst6g00462 151 ProSiteProfiles TPR repeat profile. 29 62 IPR019734 GO:0005515
Spst6g00462 151 PANTHER ANKYRIN REPEAT FAMILY PROTEIN 16 138 - -
Spst6g00462 151 Gene3D Tetratricopeptide repeat domain 26 141 IPR011990 GO:0005515
Spst6g00462 151 ProSiteProfiles TPR repeat profile. 97 130 IPR019734 GO:0005515
Spst6g00462 151 SMART tpr_5 63 96 IPR019734 GO:0005515
Spst6g00462 151 SMART tpr_5 29 62 IPR019734 GO:0005515
Spst6g00462 151 SMART tpr_5 97 130 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00462 21 125 U-box Gene Family AT3G07370 33.333 6.45e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00462 - - gmx:100798118 231.106