Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00448 ATGTTGAAGTTGAGGGTAACCCTTACCTCAAAACTAACCGTTGTGTCAAGCAGACCCGTTAGTTCGGATAAGGTTCACGCTCTATCCGCGCTGGACCGTGCCATGGGATGCCACAGTCTGCACGTTATATTCTACTACAAGAACGAGGGTAACTGGTTTGAGTCCTTTGATTTGGACCCTTTGAGGGAGTCCTTGTCGGAGGTTCTGACTCTGTACCCTACTGTGACGGGTCGGTTGGGTCGAGGGGAGGATGGTGAGTGGGAAGTGAAGTGCAATGATGCGGGCGTTCGGATCATAAAGGCCACCGTGGATGCCACCCTTCATGAATGGCTCAAATCTGCCTCTGGCTCTGAGGAGAAGCTTCTGGCTACTTGGGATGATATGCCGGAGGATCCCACCACATGGTCACCCTTTCGAATTCAGATAAACAGCTTCCAAGAAGGAGGTGTTGCCATAGGAGTAAGTTGCAGTCACATGATGGCAGATCTAACTTTCGTGGCATCATTCTTCAAATCATGGTCGGAATTTCACCGCCACTTTCCCATCACTCACTCTCCTTTAATCGCTCCACTTCCCACTCAGGTCGAGGTAGACTCTCTCCCTCGAGGCCATGCAACATTGCCATCATCATCACCATCCACAAAAGCATCCTCTTTGACAAACTTTGCCACAGCCACATTCAAGTTTTCCGATTCAACCATCAAACAATGCCTTTACAAAGTCCACGACTCATGCCCCAACGCCACTCCATTTGACTTCCTCGCGGCACTGTTTTGGTCTCGCATCGCTCGTGTCAAAGCTCCAAAACCTCACGACCAAACTCACTCTCTATGCATCTGCACCGACTTCAGGAGTCTCCTAAAACCTTCCCTCCCAATTGGGTACTTCGGAAATGCCTTGCACTTTTCAACGCTCTCGCAGAAAGTGAAAGACGTGGAACTAGGAGGCATAGTTAGTGCAGTGCATAGGCACTTGGAAGGGCTTTCAGAGGAAGAAATACGGGCTAGCAATGAAGGGAAACGCGTGTATGGGAGTGAGTTAACTTGTGTTTGCATGGAGCACTTGGTGGTTGAGGAAGATCACGAGTCGTTGCTATACGGTGCAGTATTTGGAAATAACGAGAAGCCAGTTCATGTTTCGTGTCGCGTGGGGAATGTGGAGGGTGAAGGTATGATCATGGTGATGCCTTGCTCGGAAGGAGGGCTATCAAGAACGGTGATGGTGATGGTGGCGGAGGAAGAACTCGATGAACTAAGGAAAGATGAAGCAATAATGGAGTTGCAGGCAGATATGGTTGTTGCTGGTTGTGGAATGGGCCATTGA 1323 0.4958 MLKLRVTLTSKLTVVSSRPVSSDKVHALSALDRAMGCHSLHVIFYYKNEGNWFESFDLDPLRESLSEVLTLYPTVTGRLGRGEDGEWEVKCNDAGVRIIKATVDATLHEWLKSASGSEEKLLATWDDMPEDPTTWSPFRIQINSFQEGGVAIGVSCSHMMADLTFVASFFKSWSEFHRHFPITHSPLIAPLPTQVEVDSLPRGHATLPSSSPSTKASSLTNFATATFKFSDSTIKQCLYKVHDSCPNATPFDFLAALFWSRIARVKAPKPHDQTHSLCICTDFRSLLKPSLPIGYFGNALHFSTLSQKVKDVELGGIVSAVHRHLEGLSEEEIRASNEGKRVYGSELTCVCMEHLVVEEDHESLLYGAVFGNNEKPVHVSCRVGNVEGEGMIMVMPCSEGGLSRTVMVMVAEEELDELRKDEAIMELQADMVVAGCGMGH 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00448 440 Gene3D - 203 421 IPR023213 -
Spst6g00448 440 Pfam Transferase family 5 421 - -
Spst6g00448 440 Gene3D - 1 200 IPR023213 -
Spst6g00448 440 Coils Coil 408 428 - -
Spst6g00448 440 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 24 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00448 Spst-Chr6 4178566 4180334 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00448 38 420 Monolignol Biosynthesis Gene Families AT5G48930 24.000 2.74e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00448 - - gmx:102669415 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00448 6 4178566 4180334 Spst6g00448 6 4178566 4180334 ECH