Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00434 ATGAATGAACTTCAAACAGATTCATCTGTCTCTTCTGAGTTCGTCGAAGTTGATCCAACTGGCAGATACGGCAGATACAATGAAATCCTCGGCAAAGGAGCTTCCAAGACAGTATATAGAGCATTTGATGAGTATCAAGGGATTGAAGTTGCTTGGAACCAAGTCAAATTGTACGATTTTCTGCAGAGCCCTGAAGATCTCGAGAGGCTTTACTGTGAAATTCATCTTCTCAAGACGCTGAAGCACAGAAACATAATGAAGTTTTACACGTCTTGGGTCGATACTGCAAATAGGAATATCAACTTTGTGACTGAAATGTTCACTTCTGGCACTCTTAGGCAGTATAGGCAAAAGCACAAAAGGGTTAACATTAGGGCAGTGAAGCATTGGTGTAGACAGATCCTGAGAGGGCTTCACTATCTTCATAGCCATGACCCACCTGTGATCCATAGAGATCTAAAATGTGATAATATTTTTGTCAATGGAAACCAAGGGGAAGTTAAGATTGGGGATCTTGGGTTGGCAGCAATTCTACGCAAGTCTCATGCTGCTCATTGTGTAGGAACACCCGAATTCATGGCACCTGAAGTTTATGAAGAATCATATAATGAATTAGTTGACATATATTCCTTTGGGATGTGTGTGTTAGAAATGGTCACATTTGAATATCCTTATAGTGAATGTAGTCATCCAGCGCAAATCTACAAGAAAGTTACTTCTGGGAAGAAACCGGAAGCCTTGTATAAAGTGAAGGATCCAGAAGTGCGACAATTTGTTGAGAAATGCCTGGCAACAGTGTCTCTAAGGCTCTCTGCAAGGGAGCTTTTAGATGACCCTTTTCTTCAGATTGATGATTACGAGTATGATTTAGGGCCTATGGAGAGTGGAGCATTTGATGACATGGGTTCTCTTATCCATCAGCCATTTTTTGATCTCCATCGGAGCTATAGTAACATGAGTACTGAATACTCAAATTGCCTTGAATATGAAGGAGACCGAAATTCTCATCCAGCTGAGATTGAACATAGTGGAATTGAACTTTTCGAGTGCCCTGATGATGAAGCCTCTGAAGATGTTGACATAAGCATCAAAGGAAAGAGGAAAGATGATGGTGGCATTTTTTTAAGGCTAAGAATTGCAGACAAAGAAGGACATATTCGAAATATTTATTTCCCATTTGACATAGAGATGGACACAGCATTAAGTGTAGCAACTGAAATGGTTGCAGAACTCGACATTACTGATCAGGATGTTACCAGCATAGCTGACATGATAGATGGGGAAATTGCTTCCTTGGTTCCTGAATGGAAGCGAGGACCAGGACTTGAAGAAACTAACCATTTTGTAAATAATTTTGTTTGTCACAATTGTGTGTCTAATCATACATCCAGTGGCAATATTATGGATTTTCATTCACATAATCAAGTTGGAAAGAACTTGCAGCTTCCTCAATGCTGTAGGCATGGATGTACTTCGGTGCATGGGCGGTTCGAGGAGGTAACCTTCCCATCTGAGTATGACAATCATGTGAGAGGGGATGAACCTATCAAATCAAGCCAATCAGACTGCCAGCAGTATCAGGAGTTATGGAATCATCAAGAAAGTTGTGACCTGAGTCCAGTAGAGTCTGATCAAAGCCATTCTGATGAGCCATATGAACAATTAGATAAATCAGTATTAGCAGAAGAGAAAGAAAAGGGCATTTTGGAAAACAAGTTTGCACATGATCCCGGAAACCCCCCACGAAGTTTATCTGGAAATTATTCGTCTACTATCAGTTTATTATGTCGTGGCTCCGAAAAGGAATATGAGAAAGTGGTCCAACAAGAATTGAGATGGCTCAAAGCAAACACCAAATGGATTCAAGGGATCGTAGGGACAAAAAGTTTGGTGTAG 1896 0.4061 MNELQTDSSVSSEFVEVDPTGRYGRYNEILGKGASKTVYRAFDEYQGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDTANRNINFVTEMFTSGTLRQYRQKHKRVNIRAVKHWCRQILRGLHYLHSHDPPVIHRDLKCDNIFVNGNQGEVKIGDLGLAAILRKSHAAHCVGTPEFMAPEVYEESYNELVDIYSFGMCVLEMVTFEYPYSECSHPAQIYKKVTSGKKPEALYKVKDPEVRQFVEKCLATVSLRLSARELLDDPFLQIDDYEYDLGPMESGAFDDMGSLIHQPFFDLHRSYSNMSTEYSNCLEYEGDRNSHPAEIEHSGIELFECPDDEASEDVDISIKGKRKDDGGIFLRLRIADKEGHIRNIYFPFDIEMDTALSVATEMVAELDITDQDVTSIADMIDGEIASLVPEWKRGPGLEETNHFVNNFVCHNCVSNHTSSGNIMDFHSHNQVGKNLQLPQCCRHGCTSVHGRFEEVTFPSEYDNHVRGDEPIKSSQSDCQQYQELWNHQESCDLSPVESDQSHSDEPYEQLDKSVLAEEKEKGILENKFAHDPGNPPRSLSGNYSSTISLLCRGSEKEYEKVVQQELRWLKANTKWIQGIVGTKSLV 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00434 631 Gene3D - 371 447 - -
Spst6g00434 631 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00434 631 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Spst6g00434 631 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 11 566 - -
Spst6g00434 631 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Spst6g00434 631 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00434 631 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Spst6g00434 631 CDD STKc_WNK 22 281 - -
Spst6g00434 631 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00434 631 FunFam probable serine/threonine-protein kinase WNK9 371 455 - -
Spst6g00434 631 Gene3D Phosphorylase Kinase; domain 1 8 105 - -
Spst6g00434 631 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Spst6g00434 631 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Spst6g00434 631 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 374 428 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00434 Spst-Chr6 4075034 4077752 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00434 12 500 MAP Kinase Kinase Kinase AT3G22420 58.757 0.0 589
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Spst6g00434 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00434 K08867 - gmx:100790554 1118.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00434 6 4075034 4077752 Spst6g00434 6 4075034 4077752 ECH
Spst6g00434 6 4075034 4077752 Spst10g00132 10 1324697 1327672 PCT