Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00430 ATGGCATCTCACCAACACGATGCCGTTTTTCGCGAAGAAGACATCGAGGACGATGACGACGAGTCACAGGAGGACGAAGAGTTCGAAGAAGACGACGATGTTTTGGTCGCCGAGGATGAAGAAAACGAGCCCTCTCCCTCCACTGCTCTCGCTGTCACCGTCGCCGTCCCCGGTTCCGCCGTCCCAAACGGCGGAGCCGCTCCACTTACGACGTCCACCGCCACTACCATCGTCGTAGTTGGCGACTCCTCCGATCCAAAGCGGCGGCGGGTGGAGCCAATCGAGGAGAAAAAGCCGCTGCCACTGGACGACTCGCGACGGCTGTTCCAGCGGCTTTGGACTGACGAAGACGAGATCGAGCTCCTGCAAGGGTTCCTGGACTACACCGCGCAGCGAGGATCCTCTCACCACAACGACACCGCTCTGTTCTACGACCAAATCAAGTCCAAGCTCCAACTCGATTTCAACAAGAACCAGCTAGTGGAGAAGATCCGAAGGCTGAAGAAGAAGTACCGAAACGTTCTCAACAAGATTAGCTCCGGCAAGGAATTCTCCTTCAAGAGCGCCCACGATCAAGCCACCTTCGAAATCTCGCGCAAGATCTGGAGCAGCGTGGCTCCAATCGGCGACAATTCCTTGGACGACGATGAAATCAACCCTAGCCCCAACCCCAACCCCAACCACAACCCTATCCCCCACCCTAACCTTAATTTTAGCCCTGTAATTCTTAAGAACGAAACGATTTTCAGGAATTCCGTGGAGAAGAAAACACCGAAACGCTCCCGGCCTCGATCGGCAGTGAAAGTCGAGTCAAACGATGGATCGGCATCGAACAGAGATCATAATTATACTAGCAATGCTACAGCTACGGTTACACCTACTGCTACTGCTACTAACACTACTGCCACTCCTACTACTACTACTAATAATAACAATTGTAACAGTGGTTATGGCAATAACATACCGAGTTTGATCGAGGAAACGGTGAGGAGTTGTTTGTCGCCGGTGTTGAGGGAGTTGATGGGAGCGATGGGAGGGGGAGCGTTTGGCGGGAGAGGGTTTGCGTTGAACTTAAACCCTCTGCCTTTGATGAATTTGAGTTATGGTGGTGGAGAAGTGGTGGATGAGAAATGGAGGAAGCAACAGATATTGGAGTTGGAAGTGTTCTCGAAGCGGTTGGAGCTGGTGCAGGATCAGATCAAGGCTGCGATGGAGGAGTTGCGATCCAGTGGAGGAGGAGGAGGAGGAGGTTGA 1254 0.5287 MASHQHDAVFREEDIEDDDDESQEDEEFEEDDDVLVAEDEENEPSPSTALAVTVAVPGSAVPNGGAAPLTTSTATTIVVVGDSSDPKRRRVEPIEEKKPLPLDDSRRLFQRLWTDEDEIELLQGFLDYTAQRGSSHHNDTALFYDQIKSKLQLDFNKNQLVEKIRRLKKKYRNVLNKISSGKEFSFKSAHDQATFEISRKIWSSVAPIGDNSLDDDEINPSPNPNPNHNPIPHPNLNFSPVILKNETIFRNSVEKKTPKRSRPRSAVKVESNDGSASNRDHNYTSNATATVTPTATATNTTATPTTTTNNNNCNSGYGNNIPSLIEETVRSCLSPVLRELMGAMGGGAFGGRGFALNLNPLPLMNLSYGGGEVVDEKWRKQQILELEVFSKRLELVQDQIKAAMEELRSSGGGGGGG 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00430 417 MobiDBLite consensus disorder prediction 211 234 - -
Spst6g00430 417 MobiDBLite consensus disorder prediction 12 40 - -
Spst6g00430 417 Pfam Protein of unknown function, DUF573 109 203 IPR007592 GO:0006355
Spst6g00430 417 PANTHER BNAANNG10740D PROTEIN-RELATED 2 406 IPR007592 GO:0006355
Spst6g00430 417 MobiDBLite consensus disorder prediction 250 307 - -
Spst6g00430 417 MobiDBLite consensus disorder prediction 1 48 - -
Spst6g00430 417 MobiDBLite consensus disorder prediction 268 307 - -
Spst6g00430 417 Coils Coil 157 177 - -
Spst6g00430 417 Coils Coil 386 406 - -
Spst6g00430 417 MobiDBLite consensus disorder prediction 250 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00430 Spst-Chr6 4050156 4051409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00430 1 414 GeBP Transcription Factor Family AT5G28040 43.562 2.26e-93 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Spst6g00430 DUF573 1.7e-34 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00430 - - gmx:100779712 568.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00430 6 4050156 4051409 Spst10g00127 10 1269938 1271020 PCT