Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00424 ATGGCCTCTCCATCACCATCTTCCTCTCTAACGTTTACAGTACGCAGGTGCCAACCTCAGCTTGTGCCTCCTGCTCTCCCCACTCCTCGCGAAATCAAGCTACTTTCCGACATAGATGATCAACTTGGCCTGCGTTTCCATGTTCCAGTCATACAAATCTATAGAAAGCAAGCATCAATGGGAGAGAGAGACCCGGTTGAAGTGCTTCGGCAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCAGGGAGGCTGAGGGAGGGGCCTCACCGCAAGTTGATGGTGGATTGTACCGGAGAGGGTGTCATGTTCATCCAGGCTCATGCTGACGTCACACTTGACCAATTTGGTGATTCCCTCCAACCTCCATTCCCGTGCTTCCATGAACTGCTTTATGATGTTCCTGGCTCACAAGAAATTACCAACAATCCCATTCTGCTCATACAGGTGACACGCCTTAGGTGCGGTGGTTTCATCTTGGCCTTCAACTTTAACCACACCATGTGTGATGGCGGTGGTGTTTCATCATTCATGAACGCGTGGGCTGAAATGGCTCGCGGTGCAACCAAACCTTCCATTGCACCTGTCTGGCGTAGGGAACTCTTAATGGCAAGACATCCACCTCGCATTACATGCCACCATCGCGAATACGAACATGTCCCCGACACCAACAAAGGAACCATCACATCAAACAACGATGATCACATGGTTCATCGATCGTTCTTCTTTGGACCTACCCAAGTAGCTGCTATTCGTCGTTTGGTTCCACCACACCTTCACAAATGCTCCACATTTGATCTCATCACAGCATGCTTGTGGCGTTGTCGTACAAAAGCATTGCAGATAGAGGCAGATGAGGATGTTCGCATGATGGTGATAGTGAATGCACGTGGAAGGTTCAATCCTCCTTTACCCGTTGGTTACTACGGCAATGCTTTGGCATTCCCTGCAGCAGTTACCACTGCAGGGAAGCTTTGTGAAAATCCTTTTGGGTATGCATTAGAGCTGATAAACAAAGTGAAAGGTGAGGTGACAGAAGAGTATATGCATTCTGTGGCAGATTTGATGGTGATTAAGGAACGGTGCTCATATACAACCATAAGGTCTTGTATTACTTCGGATTTGACACGTGCGAGGTTTAGAGAAGTGAACTTTGGGTGGGGTGAGGCTGTGTATGGTGGATTGGCCCGAGGAGGGGCTGGGAGGTTTCTTGGAGCATCCTTTCAGATGTCGCATAAGAATGCAAAAGGAGAAGAAGGAATAGTCTTACCAATTTGGTTGCCTGCTGAAGCTATGAATAGATTTGCAAAAGAGTTGGATGACATGTTTGGGAACCAAAATCAAACTACAATAACGATTGTATTTATATACACACTGCTTGAGTAG 1392 0.472 MASPSPSSSLTFTVRRCQPQLVPPALPTPREIKLLSDIDDQLGLRFHVPVIQIYRKQASMGERDPVEVLRQALSQTLVFYYPFAGRLREGPHRKLMVDCTGEGVMFIQAHADVTLDQFGDSLQPPFPCFHELLYDVPGSQEITNNPILLIQVTRLRCGGFILAFNFNHTMCDGGGVSSFMNAWAEMARGATKPSIAPVWRRELLMARHPPRITCHHREYEHVPDTNKGTITSNNDDHMVHRSFFFGPTQVAAIRRLVPPHLHKCSTFDLITACLWRCRTKALQIEADEDVRMMVIVNARGRFNPPLPVGYYGNALAFPAAVTTAGKLCENPFGYALELINKVKGEVTEEYMHSVADLMVIKERCSYTTIRSCITSDLTRARFREVNFGWGEAVYGGLARGGAGRFLGASFQMSHKNAKGEEGIVLPIWLPAEAMNRFAKELDDMFGNQNQTTITIVFIYTLLE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00424 463 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 442 - -
Spst6g00424 463 Gene3D - 9 219 IPR023213 -
Spst6g00424 463 Gene3D - 220 441 IPR023213 -
Spst6g00424 463 Pfam Transferase family 17 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00424 Spst-Chr6 3984428 3987840 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00424 21 441 Monolignol Biosynthesis Gene Families AT5G48930 29.630 6.08e-52 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00424 K19861 - gmx:100792864 683.33