Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00423 ATGAATAACATGGCTTCAACGTCTCCCTCTCTATCATTTGCAATGCATAAGTGCGAACCTGAGCTAGTGGCTCCTGCATTACCTACTCCTGACGAAACTAAACTACTATCTGATATAGATGATCAAAGGTACCTGCGTTGCCATTATACAATCATAAAAATCTATCGAAATGAATCATCAATGGCGAATAAAGACCCAGTGAGAGTGATTCGCCAGGCACTGGCACAAGCACTTGTCTTCTATTACCCATTTGCGGGTAGGCTTAGGGAGAGTCGTGGCAGCAAATTGATGGTCGATTGTACTGGAGAGGGTGTCATGTTCGTTGAGGCTGACGCTGACGTAACACTCGATCAATTTGGTGACAATCTCCAACCTCCATTCATGTATTCTCAAGCGTTCCAATGTGATGTTCTAGACTCTGAAGAATTTATAAAATTGCCCCTTCTACTCATCCAGGTGACACGACTCAAGTGTGGTGGTTTCATCGTGTCGACTGGTTGGAACCACGTGATGGCAGACGGAAGTGGTTTGTCACAGTTCATGCACGCCTGGGGTGAAATAGCAAGAGGTATAAAAACTCCTTCCATTGCACCTCTCTGGCGTAGGGAGCTCCTAATGGCAAGAGATCCACCTCGCATTACGTGCAACCATCGTGAATACGTTCCAATCCAAGACACCCTTTCTTCTTCCAACCACAACTTGGTTCATCGATCATTTTTCTTTGCACCTGCTCACATGGCTGCCCTTCGCCGCTTGCTTCCCCATCACCTTCGACACAGCACCGCATTCGATCTCATCACAGCATGCTTATGGCGTTGCCGCACAAAAGCACTGCAAACAGACGCAGATGAGGATGTTCGCATGATGTGCATCGTGAACGCGCGTAATAAGTTCAATCCTCCGTTACCCGTTGGTTACTACGGCAACGCTTTTGCATACCCCGCTGCAGTCACCACCGCAGGGAAGCTTTGCACAAATCCATTTGCTTATGCGGTGGAGTTGATACATAATGTGAAGGGTGAGGTGACAGAGGAGTATATGCATTCCGTGGCGGATCTAATGGTGCTCAAGGGACGGTGCATGCCCACAACTGTAAGATCTTCTCTGGTGTCAGACCTAACACGTGCGAGGTTTAGAGACGTTGATTTTGGATGGGGCAAGGCTGTGTCTGCTGGACCAGCGAAAGGTAGCACTGGACCCTTTTACGGAGGAACAAACATTACCTCGTATAGGAATGCAAAAGGAGAAGATGGTTTGGTATTACCAGTTTGGTTGCCCGCAAAAGCTATGCCCAGGTTTGTGAAAGAGATGGATGATTTGCTTAATGGAAACCAAAACCAACCTACAAGAACTGTTCCTGGTTCTATCAGGTCTACCTTCTAG 1383 0.4736 MNNMASTSPSLSFAMHKCEPELVAPALPTPDETKLLSDIDDQRYLRCHYTIIKIYRNESSMANKDPVRVIRQALAQALVFYYPFAGRLRESRGSKLMVDCTGEGVMFVEADADVTLDQFGDNLQPPFMYSQAFQCDVLDSEEFIKLPLLLIQVTRLKCGGFIVSTGWNHVMADGSGLSQFMHAWGEIARGIKTPSIAPLWRRELLMARDPPRITCNHREYVPIQDTLSSSNHNLVHRSFFFAPAHMAALRRLLPHHLRHSTAFDLITACLWRCRTKALQTDADEDVRMMCIVNARNKFNPPLPVGYYGNAFAYPAAVTTAGKLCTNPFAYAVELIHNVKGEVTEEYMHSVADLMVLKGRCMPTTVRSSLVSDLTRARFRDVDFGWGKAVSAGPAKGSTGPFYGGTNITSYRNAKGEDGLVLPVWLPAKAMPRFVKEMDDLLNGNQNQPTRTVPGSIRSTF 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00423 460 PANTHER ACYL TRANSFERASE 4 13 440 - -
Spst6g00423 460 Gene3D - 11 218 IPR023213 -
Spst6g00423 460 MobiDBLite consensus disorder prediction 441 460 - -
Spst6g00423 460 Gene3D - 219 437 IPR023213 -
Spst6g00423 460 Pfam Transferase family 19 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00423 Spst-Chr6 3979114 3980678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00423 22 394 Monolignol Biosynthesis Gene Families AT5G48930 30.077 1.25e-49 173
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00423 K19861 - gmx:100792864 602.823