Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00422 ATGGCCTCTCCATCACCATCTTCCTCTCTAACGTTTACAGTACGCAGATGCGAGCCTGAGCTTGTGCCTCCTGCTCTCCCCACTCCTCACGAAATCAAGCTACTTTCCGACATAGATGATCAACTTGGCCTGCGTTTCCATGTTCCACTCATACAAATCTATAGAAAGCAAGCATCAATGGGAGAGAGAGACCCGGTTGAAGTGCTTCGGCAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCAGGGAGGCTGAGGGAGGGGCCTCACCGTAAGTTGATGGTGGATTGTACCGGAGAGGGTGTCATGTTCATCCAGGCTCATGCTGACGTTACACTTGATCAATTCGGCGATTTCCTCCAACCTCCATTCCCCTGCTTCCATGAACTGCTCTATGATGTTCCTGCCACACAACAACTTACCAACACTCCTCTTCTACTCGTACAGGTCACACGACTCAAGTGCGGTGGTTTCATATTAGCCATCCGCCTGAACCACACCATGAGTGATGGACATGGTCTTTCACTATTCCTGAACGCTTGGGCCGAGATGGCTCGAGGTGCAAGCAAACCTTCGATTGCACCAGTGTGGCGTAGGGAGCTTCTGATGGCAAGAGATCCACCTCGCATAACATGCAAGCATCATGAATATGAGCAAATCCAAGATACCCTCACTTCTTCCAACCAAAACTTGGTTCACCGATCATTCTTCTTTGGTCCTGTCGATATAGCTGCACTTCGCGGCTTGATTCCCCAACACCTTCAGCATTGCTCCACATTTGATATGATCACAGCATGCTTCTGGCGCTGTCGCACAAAAGCATTGCGGATAGAAGCAGATGAGGATGTTCGCATGATGGTGATAGTGAACGCACGTGCTAGGTTCAATCCTCCTTTACCTGTTGGTTACTACGGCAATGGTTTTGCATATCCGGCGGCGATCACCAAAGCAGGGAAGCTTTGCGGAAATCCATTTGGGTATGCGGTGGAGTTGATAAATAAAGTGAAAGGTGAGGTGACAGAAGAGTACATGCATTCTGTGGCAGATTTGATGGTGACGAAGGGACGATGCTTATTCACAACTGTAGGGTCTTGTATTGTATCAGATTTGAGTCGTGCGAAGCTTAGAGAAGTGGACTTTGGTTGGGGTGAGGCTGTGTATGGTGGAGTGGCCCAAGGTGGAGCAGGGGAGTTTCCAGCAGTAACGTTTTTCAATCCGGTTAAGAATGAAAAAGGAGAAGAATGCATAGTATTTCCGATTTGGTTACCTGCTGAAGCCATGGAGAGGTTTGCCAAAGAGTTTAATGCCATGCTTAGCCACCAAAATCAACCTCAAAGGAGTAGTGCTATGTTTATAAGGATTATTTTATCAGTATCAATGTGTCAACATTCTTTCCTTGAGAAGAAGAGATGTAGAACACTTTTCCATCTCAAGGACGCATTTAAACGGGCCGTGAAACATAAACGTGATAAAAACAAAATAATTTTATCTCTCAAGTAA 1506 0.4655 MASPSPSSSLTFTVRRCEPELVPPALPTPHEIKLLSDIDDQLGLRFHVPLIQIYRKQASMGERDPVEVLRQALSQTLVFYYPFAGRLREGPHRKLMVDCTGEGVMFIQAHADVTLDQFGDFLQPPFPCFHELLYDVPATQQLTNTPLLLVQVTRLKCGGFILAIRLNHTMSDGHGLSLFLNAWAEMARGASKPSIAPVWRRELLMARDPPRITCKHHEYEQIQDTLTSSNQNLVHRSFFFGPVDIAALRGLIPQHLQHCSTFDMITACFWRCRTKALRIEADEDVRMMVIVNARARFNPPLPVGYYGNGFAYPAAITKAGKLCGNPFGYAVELINKVKGEVTEEYMHSVADLMVTKGRCLFTTVGSCIVSDLSRAKLREVDFGWGEAVYGGVAQGGAGEFPAVTFFNPVKNEKGEECIVFPIWLPAEAMERFAKEFNAMLSHQNQPQRSSAMFIRIILSVSMCQHSFLEKKRCRTLFHLKDAFKRAVKHKRDKNKIILSLK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00422 501 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 21 432 - -
Spst6g00422 501 SUPERFAMILY CoA-dependent acyltransferases 66 190 - -
Spst6g00422 501 Gene3D - 9 220 IPR023213 -
Spst6g00422 501 Pfam Transferase family 17 438 - -
Spst6g00422 501 Gene3D - 221 438 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00422 Spst-Chr6 3970656 3973678 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00422 21 434 Monolignol Biosynthesis Gene Families AT5G48930 29.767 9.04e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00422 K19861 - pvu:PHAVU_006G098400g 693.73