Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00419 ATGGCCTCTTCGTCACCATTTCCCTCTCTAAAGTTTACAGTACGCAGATGCGAGCCTGAGCTTGTGCCTCCTGCTCTCCCCACTCCTCATGAAACGAAGGTACTATCCGACATAGATGATCAAGATGGCCTGCGTTTCCAGATTCCAATCGTACAAATTTATCGAAAGCAAGCATCATCAATGGGAGAGAGAGACCCGGTTGAAGTGCTTCGGCAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCAGGGAGGCTGAGGGAGGGGCCTCACCGCAAGTTGATGGTGGATTGTACCGGAGAGGGTGTCATGTTCATCCAGGCTCATGCTGACGTCACGCTTGATCAATTCGGTGATTTCCTACGACCTCTGTAA 381 0.4987 MASSSPFPSLKFTVRRCEPELVPPALPTPHETKVLSDIDDQDGLRFQIPIVQIYRKQASSMGERDPVEVLRQALSQTLVFYYPFAGRLREGPHRKLMVDCTGEGVMFIQAHADVTLDQFGDFLRPL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00419 126 Gene3D - 9 126 IPR023213 -
Spst6g00419 126 Pfam Transferase family 16 122 - -
Spst6g00419 126 PANTHER ACYL TRANSFERASE 4 12 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00419 Spst-Chr6 3952058 3952438 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00419 10 122 Monolignol Biosynthesis Gene Families AT5G48930 37.168 1.38e-14 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00419 K19861 - vra:106774835 200.675