Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00416 ATGGCAATTAGTCTTTCTCTAAAGTTTACAGTACGCAGATGCGAGCCTGAGCTTGTGCCTCCTGCTCTGCCCACTCCTCATGAAACGAAGGTACTATCCGACATAGATGATCAAGATGGCCTGCGTTTCCAGATTCCGATCGTACAAATTTATCGAAAGCAAGCATCAATGGGAGAGAGAGACCCGGTTGAAGTGCTTCGGCAAGCACTGTCACAAACACTTGTCTTCTATTACCCATTTGCAGGGAGGCTGAGGGAGGGGCCTCACCGCAAGTTGATGGTGGATTGTACCGGAGAGGGTGCCATGTTCATCCAGGCTCATGCTGACGTCACACTTGATCAATTCGGTGATTTCCTCCAACCTCCATTCCCATGCTTCCATGAACTGCTCTATGATGTTCCTGCCACGCAACAACTTACCAACACTCCTCTTCTACTCGTACAGGTCACACGACTCAAGTGCGGTGGTTTCATATTAGCCATCCGCCTGAACCACACCATGAGTGATGGACATGGTCTTTCACTATTCCTGAACGCCTGGGCCGAGATGGCTCGAGGTGCAAGCAAACCTTCGATTGCACCAGTGTGGCGTAGGGAGCTTCTGATGGCAAGAGATCCACCTCGCATAACATGCAAGCATAATGAATATGAGCAAATCCAAGATACCCTCACTTCTTCCCACCACAACTTGGTTCACCGATCATTCTTCTTTGGTCCTGTCGATATAGCTGCACTTCGCGGCTTGATTCCCCAACACCTTCAGCATTGCTCCACATTTGATATGATCACAGCATGCTTCTGGCGCTGTCGCACAAAAGCATTGCAGATAGAAGCAGATGAGGATGTTCGCATGATGGTGATAGTGAACGCACGTGCTAGGTTCAATCCTCCTTTACCTGTTGGTTACTACGGCAATGGTTTTGCATATCCGGCGGCGATCACCAAAGCAGGGAAGCTTTGCGGAAATCCATTTGGGTATGCGGTGGAGTTGATAAATAAAGTGAAAGGTGAGGTAACAGAAGAGTACATGCATTCTGTGGCAGATTTGATGGTGACGAAGGGACGATGCTTATTCACAACTGTAGGGTCTTGTATTGTATCAGATTTGACTCGTGCGAAGCTTAGAGAAGTGGACTTTGGTTGGGGTGAGGCTGTGTATGGTGGAGTGGCCCAAGGTGGGGCAGGGGAGTTTCCAGGAGTAACATTTTTCAATCCAGTTAAGAATGAAAAAGGAGAAGAATGCATAGTATTTCCGATTTGGTTACCTGCTGAAGCCATGGAGAGGTTTGCCAAAGAGTTTAATGCTATGCTTAGCCACCAAAACCAACCTTAG 1332 0.4805 MAISLSLKFTVRRCEPELVPPALPTPHETKVLSDIDDQDGLRFQIPIVQIYRKQASMGERDPVEVLRQALSQTLVFYYPFAGRLREGPHRKLMVDCTGEGAMFIQAHADVTLDQFGDFLQPPFPCFHELLYDVPATQQLTNTPLLLVQVTRLKCGGFILAIRLNHTMSDGHGLSLFLNAWAEMARGASKPSIAPVWRRELLMARDPPRITCKHNEYEQIQDTLTSSHHNLVHRSFFFGPVDIAALRGLIPQHLQHCSTFDMITACFWRCRTKALQIEADEDVRMMVIVNARARFNPPLPVGYYGNGFAYPAAITKAGKLCGNPFGYAVELINKVKGEVTEEYMHSVADLMVTKGRCLFTTVGSCIVSDLTRAKLREVDFGWGEAVYGGVAQGGAGEFPGVTFFNPVKNEKGEECIVFPIWLPAEAMERFAKEFNAMLSHQNQP 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00416 443 Pfam Transferase family 13 435 - -
Spst6g00416 443 Gene3D - 218 435 IPR023213 -
Spst6g00416 443 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 17 429 - -
Spst6g00416 443 Gene3D - 5 217 IPR023213 -
Spst6g00416 443 SUPERFAMILY CoA-dependent acyltransferases 63 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00416 Spst-Chr6 3922435 3924649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00416 7 431 Monolignol Biosynthesis Gene Families AT5G48930 29.478 1.24e-52 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00416 K19861 - pvu:PHAVU_006G098400g 704.901