Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00414 ATGCAACGTTTGACCAAAATGACATATGTGGATCTCTCTGCAATTAGTCTCCGGCCATTCAAGACTAGTGATGCTGACGATTTCTTGTTATGGGCAGGGGATGATCAAGTGACTCGAAACCTCCGGTGGAAGACTTGTGGCTCCAGGGAAGAGGCTTTGGCCTTCATAAGGGATGTTTGCATACCTCATCCATGGCGTCGCTCAATCTGTCTTGACAACTGTTCCATTGGCTTTGTTTCAGTTTATCGTTGGTCAGGTGATGAAAGGTGCAAGGCTGATATAGGCTATGCTATTGGCAGGAGCTACTGGGGCAGAGGGATAGCCACCAAAGTGCTCAAGATTGCAGTGCCCGAAGTCTTCAAGGACTTTCCCGATTTGCTAAGGTTGCAGGCTTTTGTTGATGTTGACAACAAAGCTTCTCAGAGGGTGTTGGACAAGGTTGGATTTATGCGAGAGGGTGTTCTCAGAAAGTACACTTATTTCAAAGGGGTTGTTATGGATTTTGTTCTTTATAGTTTCTTGTCAACAGATGAAATTTCTCCTGATGACTAG 552 0.4529 MQRLTKMTYVDLSAISLRPFKTSDADDFLLWAGDDQVTRNLRWKTCGSREEALAFIRDVCIPHPWRRSICLDNCSIGFVSVYRWSGDERCKADIGYAIGRSYWGRGIATKVLKIAVPEVFKDFPDLLRLQAFVDVDNKASQRVLDKVGFMREGVLRKYTYFKGVVMDFVLYSFLSTDEISPDD 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00414 183 Gene3D - 12 180 - -
Spst6g00414 183 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 15 171 IPR000182 GO:0016747
Spst6g00414 183 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 13 178 - -
Spst6g00414 183 Pfam Acetyltransferase (GNAT) domain 16 149 IPR000182 GO:0016747
Spst6g00414 183 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 15 174 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00414 Spst-Chr6 3892594 3893145 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Spst6g00414 Acetyltransf_3 3.3e-22 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00414 - - vra:106775254 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00414 6 3892594 3893145 Spst6g00414 6 3892594 3893145 ECH