Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00403 ATGGGTACTGACTTAAGTTACGCGATTTCGAAGATGCAAATGCTATCTACTTCAGATTATGCCTCCGTTGTGTCCATGAACATTTTTGTGGCTCTGCTTTGTACTTGCATTGTCATTGGCCATCTTCTCGAGGAGAATCGTTGGGTGAATGAATCTATCACTGCCCTTCTGATAGGTATTAGCACTGGGGTAGTCATTTTGTTGGAAAGTCGCGGTAAAAGCTCGCATCTTCTAGTTTTCAGTGAAGATCTTTTCTTTATATACCTTCTGCCACCTATCATATTTAACGCCGGGTTTCAGGTGAAAAAGAAACAGTTTTTTGTTAACTTCATGACCATCATCCTGTTTGGAGCTGTTGGTACATTAATAAACTGTAGCATCATAACTTTCGGTGTCATACAAATTTTTAAGAGAATGGGTTTTGGTAATTCACTGGAGATAGGAGACTATCTAGCAATTGGGGCAATATTTGCTGCAACAGATTCTGTGTGCACATTGCAGGTGCTAAACCAGGATGAGACACCTTTACTGTACAGTCTTGTATTTGGCGAGGGTGTTGTGAATGATGCTACATCTGTTGTGCTTTTCAATGCAATCAAAAGTTTTGACCTCGACAAAATAGACCACAGAATTGGTTTACATTTTTTTGGCAATTTCTTCTACCTGTTTACCGCAAGCACCGTGCTTGGGGTCTTGGCCGGTCTACTTAGCGCTTACATTATTAAAACGCTATATATTGGCAGGCACTCTACAGATCGCGAGGTTGCTCTTATGATGTTAATGGCATACCTTTCCTACATTCTGGCAGAATTATGGTATCTGAGTGGCATTCTCACTGTATTTTTCTGTGGGATTGTCATGTCACATTATACTTGGCATAATGTGACTGAGAGCTCGAGAATCACTACCAAACATGCTTTTGCAACTCTTTCATTTGTCCTTGAAACCTTTATCTTCCTTTATGTTGGTATGGATGCGTTGGACATTGAAAAGTGGAGGTTTGTGAGCGATAGGCCAAAAACATCTGTTGCTGTTAGTTCAGTATTATTGGGTCTAGTACTTGCTGGAAGAGCAGCATTTGTTTTCCCCCTGTCCTTCTTAGCGAACCTCACCAAAAAGTCTCAAAGTGAAAAAATAAGTTTCAGGGAGCAGGTGATCATTTGGTGGGCTGGTCTTATGAGAGGTGCTGTTTCAATGGCACTTGCCTATAATCAGTTCACCTTGTCGGGTCACACTGAACTGCGAACTAATGCCATCATGATCACCAGCACCATCACTGTTGTGCTTGTCAGCACAATGGTGTTTGGTTTGATGACTAAGCCACTCATAAGGTTTTTGTTGCCTGTTAATCCCCCTCCTAAACGCAAAAATAGCATGGCAAATATGGAATCATCCAGTAATTCCCCCAAATCAATCACTGTGCCCTTTCTTGGAGGCTCTCATGATTCTGAAAGCGAACTTTATGGCACTGAAGATCATCGTCCAAGCATTATTCGTGCCTTACTAAGTACTCCAACACATAATGTCCATCGCTTATGGCGTACGTTTGATAATTCAGTTATGCGTCCAGTTTTTGGTGGTAGGGGATTTGTTCCAGTGGCTCCTACCTCGCCAACTGAGGGCAACGGTAGCATTCAACAGTGGCATTAA 1650 0.4194 MGTDLSYAISKMQMLSTSDYASVVSMNIFVALLCTCIVIGHLLEENRWVNESITALLIGISTGVVILLESRGKSSHLLVFSEDLFFIYLLPPIIFNAGFQVKKKQFFVNFMTIILFGAVGTLINCSIITFGVIQIFKRMGFGNSLEIGDYLAIGAIFAATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFNAIKSFDLDKIDHRIGLHFFGNFFYLFTASTVLGVLAGLLSAYIIKTLYIGRHSTDREVALMMLMAYLSYILAELWYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVLETFIFLYVGMDALDIEKWRFVSDRPKTSVAVSSVLLGLVLAGRAAFVFPLSFLANLTKKSQSEKISFREQVIIWWAGLMRGAVSMALAYNQFTLSGHTELRTNAIMITSTITVVLVSTMVFGLMTKPLIRFLLPVNPPPKRKNSMANMESSSNSPKSITVPFLGGSHDSESELYGTEDHRPSIIRALLSTPTHNVHRLWRTFDNSVMRPVFGGRGFVPVAPTSPTEGNGSIQQWH 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00403 549 PANTHER SODIUM/HYDROGEN EXCHANGER 14 525 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Spst6g00403 549 Gene3D - 146 198 - -
Spst6g00403 549 Pfam Sodium/hydrogen exchanger family 28 443 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Spst6g00403 549 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst6g00403 549 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst6g00403 549 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst6g00403 549 PRINTS Na+/H+ exchanger signature 154 164 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Spst6g00403 549 NCBIfam sodium/hydrogen exchanger 3 28 455 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00403 Spst-Chr6 3791200 3795344 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00403 10 540 Antiporters AT3G05030 75.047 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00403 - - gmx:100787925 938.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00403 6 3791200 3795344 Spst6g00403 6 3791200 3795344 ECH
Spst6g00403 6 3791200 3795344 Spst10g00111 10 985428 990353 PCT