Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00395 ATGGAGTGCAACAAGGATGAAGCTATGAGGGCTAAGCAGATTGCTGAAAATAAGATGCAAGCTGGTGACTATGAAGGAGGGCTGAAATTTGCTACAAAAGCCCAAAGGCTGTTTCCTGATATTCAGAACATTGCACAGATCCTTACAGTTTGTGAGGTCCATTGTGCTGCACAGAAGAAACGCACTGGGTCTGACATGGACTGGTATGGTATTCTTCAGACTCAACAGTCTGCTGATGAAGCAACGGTAAAGAAACAGTATAGGAAGCTTGCACTGCTACTTCATCCTGACAAAAATAAATCTGCTGGGGCAGAGGCTGCTTTCAAGTTGATTGGTGATGCTAACAGAGTGTTGAGTGACCAAACGAAGCGTACTTTGTATGACTCAAAGCTTGGTGTTCCTGGGGGAAATACAGCAGCTAAGGTTGCACCTCGTCACCCAAATGGAAATGCTTTTGGGACAAAATGTGATGGAAATTCAAGAAATTTTCAGAACAGTTTTAACTCACAACCCCAAGCTTGGAATTCATATCATCGGGTTGAAAATCAGACATTCTGGACATCTTGCCATCATTGTAACACGAGATATCAATACTTCAAAACCATTTTAAATCACACCATACGCTGTCAACAATGTTCTAAATCCTTTACAGCTCATGATATTGGGAACCACAATGTGCCACCAGCATATTGGTCACCTTTTAAGAACCACAATGAGTCTCCACAACATGCATCATCAAAAGAAGCGTTCAAAAGCAATGGTGGAAAATCATGTGGTAGAGAAGAGGAGGGTGTATCAATGTCAAAATGCACTGCTGGAGTTGGTGCCTATTCTAAAGTTGCGAAGAGCAGAAATGGCCATGTGGCTGCGGGAGTGACAATGGCTGGTGTTGAAGGGTCCAGCCCCACTAAGTCTAAAGCCAAGGAATCACAAGCCTCGACAAAGGTTGGATGTAAGAGAGGGAGGCAGTCAACTTTAGACGATGATAACAAAAATGGAAATGGTCGAGGTATGAAAGATACGAAGGATCAAGAAAAAAAGGTTGATCCTCATAGGACATCTTCAAGTAAGAAAGACCATGTTCTGTACCCAGAAACCAATAAAGAAGGTGAGTTTGGGAGTTCTTCCAAAAGGCCACGACGTCATGAATCATTTACCCCACCTAAAGTCGAGGAAAAAGAAATGCCAGCAGCTGGTGGGTTGTTCAGTGACCTTAATCCAGCCTATTGTGCTTCTGGTGTGGGTGTTCAAAATGTAGAGACAAGAAATAAAGCAAGTGAACCACCTGAAGAAACAGTTTTGAGGAATGAAACCAAAGTTGAGAAGACAAATGTGCAAAGAAAGGAGGTATCCTACTCAGATCTCAATGATAGAAAGTCAAAAGCTGACAATTGTTCTCCAGTGAAGTCTAGTTTACCTCCCAGTTCAGAGATTTTCTGTCCTGATCCAGATTTCAGTGATTTTGAGAGAGATAAGGCAGAGGATTGTTTTGCTGTTAATCAATTATGGGCTATTTTTGATAATAATGATGGCATGCCACGATTCTATGCTCTTGTCAAGAAAGTGTACTCCCCTTTTAAGTTGCGGATTACTTGGCTAGAAGCTGACTCAGATAACCAAGATGAGTTTGACTGGCATGAAGCAGGTTTGCCTGTTGCCTGTGGTAAGTTCAGACTTGGTGATTCTCAGAGAACATCAGATCGATTTATGTTCTCTCATCAGATGCATTGCGTAAAAGGAAGTGGCAGCCGTACATATCTGATATATCCAAAGAAGGGTGAAACTTGGGCAATTTTCAGAAATTGGGATCTAGGATGGAGTTCAAATACAGAAACGCATTTGGAGTATCAATTTGAATATGTTGAAGTTCTATCTGATTTTGATGAAAATGTTGGCATTGAAGTTGCTTATCTTGGCAAACTGAAAGGATTTGTTAGTCTCTTTCAGCAAACTGCGTTGAATGGTGTTAGTTTATTTTGTATTAAGCCTGATGAGATATACAGGTTCTCACACCGGATTCCTTCATACAAGATGACAGGTGCTGAAAGGAAAGGTGTTCCAAGTGGATCTTTTGAACTTGATCCTGCTGGTCTGCCTACTTGTCTTTTTGAAGTTGATGATCCTGGTGTTGTGAAGACGGATGGAGTCAATTGTTCGCACAGTGAATACTCAAACTGTAAAATTGAACAGGCAATATCTAATGATAGTATTCACAAAACAAAGTTGGAAGAGAGTATTGATGCGGAAAGAGAAGGACAAATCCTCAGAAGGTCTACAAGGTCGAGCCAAAAAAGTATGGACAATGGTCAAGCTAGCACTGGTCAATTCACGGTCAGAAAGGATAACATAAGCATTGCCCACATGTACGACAGTCCACCAGAAGGAAACACTGCTGCACCTCAGAAAGATGTGAAAAATAGTTATGATGGAGAGACGTTGAAAGCTCGAAAGTCGCCTAGAGATCTAAGCAGCAAAAATCCTCAAGGAAATGCATATGAAAGGACAACAGGTAAGGTGACTGTTAATCAGTCAAAAAACAGAAAAAATGTGAAGAGCAGCAACATTCCTCAGTCGGTGCAAGAATCATGTGATGACTTGAAGAAGGAAAGGTCTGAAAAGATGTTTCAGTGTGGTCAGATATGGGCAATATATAGTGATAGGGATCATATGCCCAATACTTACGCACAAATCAAGAAGATTGAATACAATCCTAGTTTTAGATTGCAGGTGTCCATGCTTGAACCCTGCTCACCACCAAATGACTTTAAAAAAACATTATCTTGTGGCACCTTCGAAGTTAAAAAAACCAACTTACAATTTCTTTCCCGCTCAGCATTCTCTCATCAATTAAAAGTTGAACCCCTGGTAAATAATAGATATGAAATTTACCCTAGAAAAGGTGAGGTTTGGGTTCTGTCCAAGGACCAGAACTATGAACTGACTTCTCCAGAGCAGGGCAGAGGTAACTGTCATATAGTAGAAGTATTAGCAGATAGTGACAAGAGTATACAAGTTGTTGTTCTGACGCCACATAACAACTCTCGGACAATTTTCAAGGCTCCTAGAATTCAGAGATCAAAAACTGGTGTAATTGAAATATTAAGAGAAGAGGTTGGCAGATTTTCACATCAGATTCCTGCTTATCAGCACAGTGACAGTGTTCATCGCAGAGGGTGTTGGGAGCTTGATCCTTCTTCAGTTCCAGGTTCTTTCGTACCAATAGACTGA 3228 0.4105 MECNKDEAMRAKQIAENKMQAGDYEGGLKFATKAQRLFPDIQNIAQILTVCEVHCAAQKKRTGSDMDWYGILQTQQSADEATVKKQYRKLALLLHPDKNKSAGAEAAFKLIGDANRVLSDQTKRTLYDSKLGVPGGNTAAKVAPRHPNGNAFGTKCDGNSRNFQNSFNSQPQAWNSYHRVENQTFWTSCHHCNTRYQYFKTILNHTIRCQQCSKSFTAHDIGNHNVPPAYWSPFKNHNESPQHASSKEAFKSNGGKSCGREEEGVSMSKCTAGVGAYSKVAKSRNGHVAAGVTMAGVEGSSPTKSKAKESQASTKVGCKRGRQSTLDDDNKNGNGRGMKDTKDQEKKVDPHRTSSSKKDHVLYPETNKEGEFGSSSKRPRRHESFTPPKVEEKEMPAAGGLFSDLNPAYCASGVGVQNVETRNKASEPPEETVLRNETKVEKTNVQRKEVSYSDLNDRKSKADNCSPVKSSLPPSSEIFCPDPDFSDFERDKAEDCFAVNQLWAIFDNNDGMPRFYALVKKVYSPFKLRITWLEADSDNQDEFDWHEAGLPVACGKFRLGDSQRTSDRFMFSHQMHCVKGSGSRTYLIYPKKGETWAIFRNWDLGWSSNTETHLEYQFEYVEVLSDFDENVGIEVAYLGKLKGFVSLFQQTALNGVSLFCIKPDEIYRFSHRIPSYKMTGAERKGVPSGSFELDPAGLPTCLFEVDDPGVVKTDGVNCSHSEYSNCKIEQAISNDSIHKTKLEESIDAEREGQILRRSTRSSQKSMDNGQASTGQFTVRKDNISIAHMYDSPPEGNTAAPQKDVKNSYDGETLKARKSPRDLSSKNPQGNAYERTTGKVTVNQSKNRKNVKSSNIPQSVQESCDDLKKERSEKMFQCGQIWAIYSDRDHMPNTYAQIKKIEYNPSFRLQVSMLEPCSPPNDFKKTLSCGTFEVKKTNLQFLSRSAFSHQLKVEPLVNNRYEIYPRKGEVWVLSKDQNYELTSPEQGRGNCHIVEVLADSDKSIQVVVLTPHNNSRTIFKAPRIQRSKTGVIEILREEVGRFSHQIPAYQHSDSVHRRGCWELDPSSVPGSFVPID 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00395 1075 Pfam Domain of unknown function (DUF3444) 477 682 IPR024593 -
Spst6g00395 1075 Pfam Domain of unknown function (DUF3444) 864 1051 IPR024593 -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 822 861 - -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 743 778 - -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 232 262 - -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 235 252 - -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 321 390 - -
Spst6g00395 1075 PRINTS DnaJ domain signature 103 123 IPR001623 -
Spst6g00395 1075 PRINTS DnaJ domain signature 69 87 IPR001623 -
Spst6g00395 1075 PRINTS DnaJ domain signature 87 102 IPR001623 -
Spst6g00395 1075 SUPERFAMILY Chaperone J-domain 64 130 IPR036869 -
Spst6g00395 1075 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 1068 - -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 814 865 - -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 295 394 - -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 298 320 - -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 743 757 - -
Spst6g00395 1075 CDD DnaJ 67 120 IPR001623 -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 787 806 - -
Spst6g00395 1075 Pfam DnaJ domain 67 128 IPR001623 -
Spst6g00395 1075 Gene3D DnaJ domain 64 178 IPR036869 -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 444 469 - -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 444 464 - -
Spst6g00395 1075 SMART dnaj_3 66 123 IPR001623 -
Spst6g00395 1075 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Spst6g00395 1075 MobiDBLite consensus disorder prediction 758 778 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00395 Spst-Chr6 3721188 3724415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00395 4 228 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 33.913 7.48e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00395 - - gmx:100782762 1687.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00395 6 3721188 3724415 Spst6g00395 6 3721188 3724415 ECH
Spst6g00395 6 3721188 3724415 Spst10g00106 10 962901 963863 PCT