Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00384 ATGTCGAGGAGAAAGGTTAGAGAGCCAAAGGAAGAAAATGTGACTCTGGGTCCAGCTGTTAGAGACGGTGAACATGCCTTTGGCGTCGCTCGCATCTTTGCCTCATTTAATGATACCTTCATCCATGTCACTGATTTGTCTGGGAGGGAAACACTTGTCCGCATCACTGGTGGGATGAAGGTTAAAGCTGATAGAGATGAATCATCTCCCTACGCTGCTATGCTTGCAGCACAAGATGTTGCTGCCAGATGCAAGGAGCTGGGAATAACTGCTCTTCATATCAAACTCCGCGCCACTGGTGGGAACAAGACAAAGACACCTGGTCCAGGTGCTCAATCAGCTCTACGAGCACTTGCTCGTTCGGGGATGAAAATTGGTCGTATAGATTTAAATGTTTCAAAGCAACACATATACTTGCATGCTTTTCAACAAGATTCTTGTCCAAATATATATCTATACACACATGGTATTCTGCTACGTCTCATGCGAAACAGAGTTTATGTAAACAACCACAAATAG 519 0.4451 MSRRKVREPKEENVTLGPAVRDGEHAFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIDLNVSKQHIYLHAFQQDSCPNIYLYTHGILLRLMRNRVYVNNHK 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00384 172 FunFam 40S ribosomal protein S14 1 136 - -
Spst6g00384 172 Pfam Ribosomal protein S11 28 129 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g00384 172 Gene3D Ribosomal protein S11 1 136 IPR036967 GO:0003735|GO:0005840|GO:0006412
Spst6g00384 172 Hamap 30S ribosomal protein S11 [rpsK]. 3 147 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g00384 172 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 3 130 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g00384 172 SUPERFAMILY Translational machinery components 25 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00384 Spst-Chr6 3651239 3654766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00384 1 129 Cytoplasmic Ribosomal Protein Gene Family AT3G52580 89.147 1.50e-83 241