Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00322 ATGATCGAGTCACTCTTTGGCTACAATTTACAAAATTCAATGAAGAACGATGAAACAAAGAGTAAAACCCCGTCTCCTAACAAGCATCTACTTGAGCCAAAACGGTTGCAAAACATAGCAATACTGTCTAAAGCACTAAATGCAACAGCCAGGGAAGTATGCGATGCTCTGATACTAGGGAAGGGTTTGTCTTTGCAACAACTAGAGGCACTGGTGAAAATGGTACCCACGAAGGAAGAAGAGGATAAGCTCTTGAGCTACAAAGGACAAGTCGATGAACTAGGGTTCGCAGAAAAGTTTGTGAGAGCAATGCTTAGCATACCATTTGCCTTTCAACGAGTGGAAGCAATGCTTTACAGAGAAGCTTTCGAAGATGAAGTGGCTCACCTCAGCAACTCTTTCACAATGTTGGAGGAAGCGTGCAAGGAACTAAGGTCAAGCAAGTTCTTCTTGAAATTGCTCGAAGCAGTGCTCAAAACAGGAAACCGCATGAACGTGGGGACAACCAGGGGAGGTGCTAGAGCCTTCAAACTTGATGCCCTTCTCAAGCTTGCTGATGTAAAAGGAACAGATGGTAAAACCACCTTGCTCCATTTCTTTGTTCAGGAGATAATTCGCTCAGAAGGAACCAAAGCTTCAAAGAGCATCATGGGGCAGAAGCGTGAAAACGGAACGGAGGAAGAGAAGGAAGAAGATTGTAGAAGAATGGGACTAAAACTTGTCTCTGATCTTAGTGCTGAGTTATGCAATGTTAAAAAGACCGCCACAATTGACTTAAGCGTTCTTGCAAGTTCTGTCTCGAACCTATCAACTGGGTTGGCTAACATGCAGAACCTAGTAAGAGGGTTGTTGTGTGAAGATGAAAAAAATAAGAGCTTTGTCATTTCTATGAAGTGGTTTCTGAATTATGCAGAAAGAAAGGTACAAGACTTGCATGGAGATGAAGGTAGAGTGATGAGTCGTGTAAAAGAAATAACTGAGTATTTTCATGGGGATGTGACTAACGAAGAGTCGAATCCACTTCAAATCTTTGTGATTGTTAGGGACTTTCTGGAGATGATAGATAACGTGTGTAATGATCTTAAAAAGTCTATGAAACCCCCTCGCGCTATTTGTGTAGAGTAG 1125 0.4222 MIESLFGYNLQNSMKNDETKSKTPSPNKHLLEPKRLQNIAILSKALNATAREVCDALILGKGLSLQQLEALVKMVPTKEEEDKLLSYKGQVDELGFAEKFVRAMLSIPFAFQRVEAMLYREAFEDEVAHLSNSFTMLEEACKELRSSKFFLKLLEAVLKTGNRMNVGTTRGGARAFKLDALLKLADVKGTDGKTTLLHFFVQEIIRSEGTKASKSIMGQKRENGTEEEKEEDCRRMGLKLVSDLSAELCNVKKTATIDLSVLASSVSNLSTGLANMQNLVRGLLCEDEKNKSFVISMKWFLNYAERKVQDLHGDEGRVMSRVKEITEYFHGDVTNEESNPLQIFVIVRDFLEMIDNVCNDLKKSMKPPRAICVE 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00322 374 SUPERFAMILY Formin homology 2 domain (FH2 domain) 29 367 - -
Spst6g00322 374 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 374 IPR015425 -
Spst6g00322 374 PANTHER FORMIN-RELATED 1 366 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst6g00322 374 SMART it6_source 2 369 IPR015425 -
Spst6g00322 374 Gene3D Formin, FH2 domain 1 369 IPR042201 -
Spst6g00322 374 Pfam Formin Homology 2 Domain 3 353 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00322 Spst-Chr6 3178229 3179731 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00322 1 362 FH2 protein (formin) Gene Family AT3G05470 70.300 1.93e-174 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00322 - - gmx:100805407 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00322 6 3178229 3179731 Spst6g00322 6 3178229 3179731 ECH
Spst6g00322 6 3178229 3179731 Spst10g00037 10 398866 400638 PCT