Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00321 ATGAGGCTCATCATTACCATATTGATGTTCCTATCATTGCAAAGAGCCAACATTTTGACTGTGGATGCTGCGTTGCATGCAGCAGGAAATGAAAAGCAGTTCAAGAAAATCTCAGGAGAGGATGAGAATGAAAACAAGGAAACTCCTAGACTTGAAGACTTCACAACTTTGTTTGGACTCAAGTCATTCAACAGGTTTCACAGAAGAAGGTCATGCTATAATGTTTTTGACTCTGACTTTGTGTCCCTCTCAGCTTCTGTGTCACCCAAAACCGAAGCTGAGGCTCCGAATTCGGATCTGCACGTGCACCCTCGTTCCTATCACTCACAAAGGAACATGCCACTTCACAAGATTCAACAAGAAGATGGAGGTAGCGCAAATAGAACAACACTAGTGGCTGTTGTAGTATCTGGTGGAGTTGCTACGTTAATCTGTGCACTTGGCTGTGTCTGTGTTTGCAAGAAATTTAGAAATCAGAGACGGAAATCCAATAGGACAATTCCACTTTTTAGCAAGATCGGAAGAACAGGAGGTACGTACCGAAATTCAGACCCTGATTTGCTTTACATCACTAGTTTGAAACAAACTTGTGAGACACAAAAAAGTACCTCAAGCCATAGTTCCCTAAAGCGTGCAATTTATGAGACGGAAGTGTTGAATCAAGAAGCATACAACAATGCTAGCACGGGAAGTTCTTCCATCAAGGAAATTCTCTCTGTTCACGAGGAATTGGAATATGATGGTGGCAAAGCTTCCTCTGGAGAAAAAACTGTCCCTGGAGAATCTCATTCATCATCAGATTACGAAAGTTTTCATTCATGTATTGATTCACATTCATCAATAAGTGAAACAGAACGGTTATCTCTCTCTCCTAGAAATTTAATTTCTGAAACAACTCAATTTCCTTGTTCTTCTCATAATTCAACTCCAAAGGTAGAATCTAACCAATCACCATCCATTCCAAAACATGAAGAACAAAAGAAGAGCGGAATTTCTCAACCTAGCATTCCTCCCCCACCATGTCCACCTCCTTTTATGAAAGAAAACATTAACAGTATGATAAAAAACCCAACTTCTAAACAACTGCCAAAACTCAAACCACTTCACTGGGACAAGGTAAGAGCCACGCCGGATCGAACAATGGTATGGGACACGCTACGAACAAATTCCTTTGAGTGA 1179 0.4088 MRLIITILMFLSLQRANILTVDAALHAAGNEKQFKKISGEDENENKETPRLEDFTTLFGLKSFNRFHRRRSCYNVFDSDFVSLSASVSPKTEAEAPNSDLHVHPRSYHSQRNMPLHKIQQEDGGSANRTTLVAVVVSGGVATLICALGCVCVCKKFRNQRRKSNRTIPLFSKIGRTGGTYRNSDPDLLYITSLKQTCETQKSTSSHSSLKRAIYETEVLNQEAYNNASTGSSSIKEILSVHEELEYDGGKASSGEKTVPGESHSSSDYESFHSCIDSHSSISETERLSLSPRNLISETTQFPCSSHNSTPKVESNQSPSIPKHEEQKKSGISQPSIPPPPCPPPFMKENINSMIKNPTSKQLPKLKPLHWDKVRATPDRTMVWDTLRTNSFE 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00321 392 PANTHER FORMIN-RELATED 69 392 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Spst6g00321 392 MobiDBLite consensus disorder prediction 246 272 - -
Spst6g00321 392 MobiDBLite consensus disorder prediction 257 272 - -
Spst6g00321 392 MobiDBLite consensus disorder prediction 299 351 - -
Spst6g00321 392 ProSiteProfiles Formin homology-2 (FH2) domain profile. 355 392 IPR015425 -
Spst6g00321 392 MobiDBLite consensus disorder prediction 299 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00321 Spst-Chr6 3176957 3178135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00321 337 392 FH2 protein (formin) Gene Family AT3G05470 61.017 6.78e-15 74.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00321 - - gmx:100805407 482.641