Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00306 ATGGCCACGATGGAGGGGATGATGGACAAGGCGGTGTTGGATGATGTCATTAGGAGGCTTCTGGAAGGAAAAGGAGGAAAGCAGGTGCAACTTTCTGAATCGGAAATCCGTCAGCTCTGTGTTAACGCCAGACAAATCTTCCTCTCTCAGCCAATTCTTCTTGATCTTCGTGCCCCAATCCGCATTTGCGGTGATATACATGGTCAATATCAAGACTTACTTAGGCTATTTGAATATGGTGGGTACCCTCCTGCAGCAAACTACTTGTTTCTAGGGGATTATGTGGATAGAGGGAAGCAAAGCTTGGAGACTATTTGTTTGCTTTTGGCCTACAAAATAAGATATCCAGACAAAATTTCTCTCTTGAGGGGAAACCATGAAGAAGCAAAGATTAATCGTATATATGGTTTCTATGACGAATGTAAAAGGAGGTTCAATGTAAGGTTGTGGAAGATATTTACGGACTGTTTTAATTGTTTGCCCGTGGCTGCCCTCATTGATGAGAAAATACTTTGTATGCATGGGGGACTTTCTCCAGAATTAGAAACTTTGGATCAAATAAGAGAGATTCAAAGGCCTACAGAAATTCCAGATGGTGGTCTCTTATGTGATCTACTTTGGTCTGATCCTGATGCTAACATTGAGGGTTGGGCAGATAGTGACCGAGGCGTTTCGTGTACTTTTGGACCTGATGTAGTTGCAGAGTTTTTGGATAAAAATGACCTTGATCTTGTTTGCAGAGGGCATCAGGTTGTGGAGGATGGATACGAGTTTTTTGCTAAAAGAAGATTAGTCACAATATTTTCTGCTCCAAATTATGGTGGAGAATTTGACAATGCTGGTGCATTGTTAAGCGTTGATGATTGTCTTGTATGTTCCTTTGAGATATTGAAACCCGCTGATAAAGCATCGGGAAGTAATTCTTCAAAAATGAATTTTAAGAAGTATCTGTTGCCACTTTCTTTAGCAGCCACCCAAAGTCGGAAAGACCTAGTAATTGGCAAAGATTTTAAGTTCAAATAG 1023 0.4086 MATMEGMMDKAVLDDVIRRLLEGKGGKQVQLSESEIRQLCVNARQIFLSQPILLDLRAPIRICGDIHGQYQDLLRLFEYGGYPPAANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKISLLRGNHEEAKINRIYGFYDECKRRFNVRLWKIFTDCFNCLPVAALIDEKILCMHGGLSPELETLDQIREIQRPTEIPDGGLLCDLLWSDPDANIEGWADSDRGVSCTFGPDVVAEFLDKNDLDLVCRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDDCLVCSFEILKPADKASGSNSSKMNFKKYLLPLSLAATQSRKDLVIGKDFKFK 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00306 340 SMART pp2a_7 31 301 IPR006186 GO:0016787
Spst6g00306 340 PRINTS Serine/threonine phosphatase family signature 121 145 IPR006186 GO:0016787
Spst6g00306 340 PRINTS Serine/threonine phosphatase family signature 59 86 IPR006186 GO:0016787
Spst6g00306 340 PRINTS Serine/threonine phosphatase family signature 263 279 IPR006186 GO:0016787
Spst6g00306 340 PRINTS Serine/threonine phosphatase family signature 241 261 IPR006186 GO:0016787
Spst6g00306 340 PRINTS Serine/threonine phosphatase family signature 88 115 IPR006186 GO:0016787
Spst6g00306 340 PRINTS Serine/threonine phosphatase family signature 155 181 IPR006186 GO:0016787
Spst6g00306 340 PRINTS Serine/threonine phosphatase family signature 184 211 IPR006186 GO:0016787
Spst6g00306 340 Pfam Calcineurin-like phosphoesterase 60 251 IPR004843 GO:0016787
Spst6g00306 340 SUPERFAMILY Metallo-dependent phosphatases 8 302 IPR029052 -
Spst6g00306 340 Gene3D - 5 309 IPR029052 -
Spst6g00306 340 FunFam Serine/threonine-protein phosphatase 4 309 - -
Spst6g00306 340 Pfam Serine-threonine protein phosphatase N-terminal domain 13 57 IPR031675 -
Spst6g00306 340 ProSitePatterns Serine/threonine specific protein phosphatases signature. 122 127 IPR006186 GO:0016787
Spst6g00306 340 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 17 311 - -
Spst6g00306 340 CDD MPP_PP1_PPKL 12 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00306 Spst-Chr6 3043438 3045647 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00306 54 247 Calmodulin-binding Proteins AT5G63870 33.188 2.52e-31 118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00306 K06269 - gmx:100813792 622.854