Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00287 ATGAAACCCTTCCGTACATTACGCACAAAGAAAGGAAGGCCAGAATCTAAGAAAGAACAAGCACGAAGCATAGGATCATTGGAGAACACAAAAGATTCAGATTTATATATGAATATGGCTCCTGTTTCACTGCCTCCTGGGTTTCGGTTCCACCCCACCGATGAAGAACTTGTTTCTTATTACCTCAAAAGAAAGATAAATGGTCGTAAGATCGAACTAGAGATTATCCCTGAAGTTGACCTTTATAAGTGCGAACCATGGGACTTGCCAGGGAAGTCATTGTTACCGGGAAAAGATTTGGAGTGGTATTTCTTCAGCCCTCGAGATAGGAAATACCCAAATGGATCAAGAACAAATCGTGCAACCAAGTCTGGGTACTGGAAAGCCACAGGGAAAGACCGTAAGGTGAATTCTCAGAGTTGTGCCATAGGGATGAAGAAAACCCTAGTTTACTATCGAGGTAGGGCACCGCATGGTTGTCGCACAGGTTGGGTTATGCATGAGTACCGTCTTGATGAGACACAGTGTGAAACCAATTCAGGCTTGCAGGATGCATATGCTCTTTGTCGTGTGTTCAAGAAGACTGCGGTGATTCCTCCAAAAGTTGGAGATCAACACTATGTTAATGTGACCACCAGCCATGCCAATCAGATCATTGCAAGTGATCAATCATCAAGCATTAACGAGCTATACTCTGAAGGAAGAGGTGAAGTTTTAGAGAGCTCAAATTATCTGATGTCGTTGGATACAAGTTCATCCCCAAACATAAATGGGACTACTTTCAATATCAATGGTAGAACAAGGGATAATGAGACAACATGGTCACGTTTCTTATCAGAAGACTTGCTCAATCTTCCACCCTCCACTTCTTCATTTCCCAATTACGGATCCATGAGCTATCCTCCATCAAGGGTGGATATAGCACTAGAGTGTGCAAGGATGCAGCATAGGTTTACCATTCCTCCATTGCAGAGGCAGGACTTGGACTTCCCTCTAGTTGGCATTTCCGAGCTGAAGATGGCACAAGCCTCGAGTTCCATGAGTGGAATCAGAAATGAAACAGATATCTTGCAGGAAATTCTTTCAGTTGCTCATGCTTCCCAGGAATTAATAAATCAATCCAACTACTCATCACAGCCATTCATGAATGCCAATGAAAATTATGCTCCTCATGAAAGTGATTTTACTTTTATGGTTGGCACCAACGACAATCACGTCAACGACATGAACACCATTGGATTTGGTGACAAAGCATGGGAAGACCAACACACAAGATCTATCGAGATTGGAGATTTTGACGATGGATTCAAGACAGAGAGGATGATAGAGAATTTAAGATGCGTGGGAATGTCCAGCAAAAACGTGGAAAAGAGCTTGATGCAAGAGCAAAATATTGTTCCAATTGAAGACATTTCAAACTTCCAAACTAATACTGAAGAAAACAAGCTTCGAGTAGGATTCGAGAAACACAGTTGCAACAAAGAAATCAACCATACTGACATTGATGATTTTCCAATGGGATTCATCAATGACGAGGATCCCAACGAGAACTTCATAAATGAGGATAACATTGATTATTCAAATCCTACAAACTTAGAGGTTGTGGAGGAAACAAAAACCAATCATGGAATGTTTGTGTCCACTCATCAAGTAGCTGATACATTCTTTCATCAAATAGCTCCTTCACAAACCCTCAAAGTTCAACTCAATCCAGTAATGGCTGAGAATGCAATAATGGTTAATCAAGGACCCTCTTTCTTTAGAAAGTTTAAGGCCTATGTGACAGGGAAGCTAATAAAGCCATCAAGCACAATAGCTACTGCCCTTGCATCCATCTTTGCACTTTTGTTGATGCATTGTGTGTTTTTAAAGGAATTAGTGGAAGATTGGAAATCAGACCTTAAACGATGTGGTGGTGTTTACACAATGAAGACAATGAGACAACCAGCTGATGAGACTATCATTAGGAATGAACAAGAAAAAGTTTGGTTTGTTGGTATTAAGTATGGGAAGGGATTTATCATGGTCTTGAAGAAGATAAGTATTTTGCTGACTATATCATTGGCTCTTTGTGCCATGTGGGCTAACCATATCATAGTTGACTCTTAG 2109 0.4083 MKPFRTLRTKKGRPESKKEQARSIGSLENTKDSDLYMNMAPVSLPPGFRFHPTDEELVSYYLKRKINGRKIELEIIPEVDLYKCEPWDLPGKSLLPGKDLEWYFFSPRDRKYPNGSRTNRATKSGYWKATGKDRKVNSQSCAIGMKKTLVYYRGRAPHGCRTGWVMHEYRLDETQCETNSGLQDAYALCRVFKKTAVIPPKVGDQHYVNVTTSHANQIIASDQSSSINELYSEGRGEVLESSNYLMSLDTSSSPNINGTTFNINGRTRDNETTWSRFLSEDLLNLPPSTSSFPNYGSMSYPPSRVDIALECARMQHRFTIPPLQRQDLDFPLVGISELKMAQASSSMSGIRNETDILQEILSVAHASQELINQSNYSSQPFMNANENYAPHESDFTFMVGTNDNHVNDMNTIGFGDKAWEDQHTRSIEIGDFDDGFKTERMIENLRCVGMSSKNVEKSLMQEQNIVPIEDISNFQTNTEENKLRVGFEKHSCNKEINHTDIDDFPMGFINDEDPNENFINEDNIDYSNPTNLEVVEETKTNHGMFVSTHQVADTFFHQIAPSQTLKVQLNPVMAENAIMVNQGPSFFRKFKAYVTGKLIKPSSTIATALASIFALLLMHCVFLKELVEDWKSDLKRCGGVYTMKTMRQPADETIIRNEQEKVWFVGIKYGKGFIMVLKKISILLTISLALCAMWANHIIVDS 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00287 702 SUPERFAMILY NAC domain 37 194 IPR036093 GO:0003677|GO:0006355
Spst6g00287 702 Gene3D NAC domain 53 197 IPR036093 GO:0003677|GO:0006355
Spst6g00287 702 MobiDBLite consensus disorder prediction 8 25 - -
Spst6g00287 702 ProSiteProfiles NAC domain profile. 44 194 IPR003441 GO:0003677|GO:0006355
Spst6g00287 702 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 43 294 - -
Spst6g00287 702 MobiDBLite consensus disorder prediction 1 30 - -
Spst6g00287 702 FunFam Nac domain-containing protein 86 53 197 - -
Spst6g00287 702 Pfam No apical meristem (NAM) protein 45 171 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00287 Spst-Chr6 2885284 2892712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00287 39 621 NAC Transcription Factor Family AT1G65910 45.847 7.23e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Spst6g00287 NAM 3.1e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00287 - - gsj:114381841 1039.64