Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00266 ATGGGTGCTCCACAGACGCATCTAGTAAACAAAGGGTGCAGCTCATTCAACGCGACAAACCTGAGCAGCTTCTATGCGAATATCAATGGAACATTTTCAGAGCTTAGAAGAGATATTAGCAATAACAGCAAACACTTTGGCACAGCACAGCAAGTCAGAGGAGAAGTCCTCACCTATGCCATGTTTCAGTGCAGAAACTATCTCTCCAAAAATGATTGTCTTTCTTGCTTCGACACCGCCTCAACCCAAGCCCGCAACTGCTCCGCCGCCAACGGTGCCAGAGTCATCTACGATGGTTGCTTCCTCAGGTACGAGAGCGAGAGGTTCTTCGATCAGACCAATGAACTTGGGAGTGGTGTATCATGTGGGAACACCACTCTAAATACCACTGGTTTTAAATTAGGTGGTCAGCAAGCCTTAATAGACCTCTTTACAGCAACACCCAAGATTGCAAATTTTTATGCAGCTACTAAGACACTGGTGGCTGCTGCTACTGCAATTTATGCCGTTGCACAGTGTGTTGAAACTGCCTCTGAGACTAATTGTCTCAACTGCTTGCAAATTGGGTACGACAACATACAAAGTTGTCTTCCCCACACAGAGGGTAGAGCGTATGATGCTGGTTGTTTTATGAGATACTCCACCACACCTTTCTTTGCTGATAATCAGACCATTGATATTGCACCCTATTTGAAAAAAGGAGATTCAAGCAAGAAATGGGCCATAATAGGTGGTAGTGTTGGAGCTTTTGTTGTTCTCCTCTTAGCGTTGTTTGCATGGCGATGGTTTAGAAAACCGAAGAGGGTTCCTAGAGGTGACATATTGGGAGCAACTGAGTTGAAAGGTCCAGTTAATTACAAGTATAACGACTTGAAAGCTGCAACAAAAAATTTCAGTGTTGAAAACAAACTTGGAGAAGGAGGTTTCGGTGATGTATACAAGGGTACTCTGAAAAATGGAAAGATTGTTGCCGTAAAAAAACTAGTTTTCGGAAAATCAAGCAAGATGGAGGATGATTTTGAAGGTGAAGTGAAGCTTATAAGTAATGTTCATCACCGAAATCTCGTTAGACTTCTTGGTTGTTGCAGCAAAGGTCAAGAGAGAATCTTAGTTTATGAATACATGGCAAATAGTAGTCTTGACAAATTCTTATTTGGTAACAAAAAAGGTTCCCTCAGTTGGAAACAACGCTATGATATAATTTTAGGCACGGCAAGGGGACTAGCATACCTACATGAGGAGTTCCACGTGTCCATCATACATAGAGATATCAAGACTTCTAATATCCTCTTGGATGATGATCTTCAACCAAAAATTGCTGATTTTGGATTGGCAAGGCTTCTTCCACAGGATCGTTCTCATCTTAGCACAAGATTTGCAGGGACATTGGGATACACAGCGCCTGAGTATGCAATCCATGGTCAATTATCAGAGAAGGCTGATACCTACAGCTATGGTGTTGTAGTCCTAGAAATCATAAGTGGTCAAAAGAGTACCGATGTGACGGGTGATGAGGATGGTCGTGAATACCTACTTCAACGAACATGGAAACTGTATGAGAGAGGCATGCACTTGGAGCTGGTGGACAAGGCCATAGACCCTAGTGAATATGATGTAGAGGATGTTAAGAAAATCATAGAAATTGCTTTGCTATGCACTCAGGCATCAGCTGCAACGAGACCAACAATGTCTGAAGTCGTAGTGCTACTCAAAAGCAAGAGCTTGGTGGAGCACCTGCGACCAACTATGCCTGTGTTTGTTGAAACGAATATCAAGACTCGCGAAAGCAACTCTAGCTCAACCACTGGTTCTTCATCTAATGCCACTGCCTCCATTTCAGTTCTATCAGCACGATGA 1857 0.4303 MGAPQTHLVNKGCSSFNATNLSSFYANINGTFSELRRDISNNSKHFGTAQQVRGEVLTYAMFQCRNYLSKNDCLSCFDTASTQARNCSAANGARVIYDGCFLRYESERFFDQTNELGSGVSCGNTTLNTTGFKLGGQQALIDLFTATPKIANFYAATKTLVAAATAIYAVAQCVETASETNCLNCLQIGYDNIQSCLPHTEGRAYDAGCFMRYSTTPFFADNQTIDIAPYLKKGDSSKKWAIIGGSVGAFVVLLLALFAWRWFRKPKRVPRGDILGATELKGPVNYKYNDLKAATKNFSVENKLGEGGFGDVYKGTLKNGKIVAVKKLVFGKSSKMEDDFEGEVKLISNVHHRNLVRLLGCCSKGQERILVYEYMANSSLDKFLFGNKKGSLSWKQRYDIILGTARGLAYLHEEFHVSIIHRDIKTSNILLDDDLQPKIADFGLARLLPQDRSHLSTRFAGTLGYTAPEYAIHGQLSEKADTYSYGVVVLEIISGQKSTDVTGDEDGREYLLQRTWKLYERGMHLELVDKAIDPSEYDVEDVKKIIEIALLCTQASAATRPTMSEVVVLLKSKSLVEHLRPTMPVFVETNIKTRESNSSSTTGSSSNATASISVLSAR 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00266 618 FunFam Cysteine-rich receptor-like protein kinase 2 375 578 - -
Spst6g00266 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672|GO:0006468
Spst6g00266 618 ProSiteProfiles Gnk2-homologous domain profile. 113 218 IPR002902 -
Spst6g00266 618 SMART serkin_6 298 576 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00266 618 Pfam Salt stress response/antifungal 151 215 IPR002902 -
Spst6g00266 618 Pfam Salt stress response/antifungal 16 106 IPR002902 -
Spst6g00266 618 ProSiteProfiles Gnk2-homologous domain profile. 6 109 IPR002902 -
Spst6g00266 618 Gene3D Phosphorylase Kinase; domain 1 274 374 - -
Spst6g00266 618 CDD STKc_IRAK 304 571 - -
Spst6g00266 618 MobiDBLite consensus disorder prediction 594 618 - -
Spst6g00266 618 ProSiteProfiles Protein kinase domain profile. 298 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00266 618 Pfam Protein kinase domain 299 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00266 618 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 59 605 - -
Spst6g00266 618 FunFam Cysteine-rich receptor-like protein kinase 2 264 374 - -
Spst6g00266 618 Gene3D Transferase(Phosphotransferase) domain 1 375 583 - -
Spst6g00266 618 ProSitePatterns Protein kinases ATP-binding region signature. 304 327 IPR017441 GO:0005524
Spst6g00266 618 FunFam Cysteine-rich receptor-like protein kinase 2 117 218 - -
Spst6g00266 618 SUPERFAMILY Protein kinase-like (PK-like) 281 570 IPR011009 -
Spst6g00266 618 Gene3D - 118 218 IPR038408 -
Spst6g00266 618 Gene3D - 5 109 IPR038408 -
Spst6g00266 618 FunFam Cysteine-rich receptor-like protein kinase 2 5 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00266 Spst-Chr6 2669237 2672952 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00266 2 618 Receptor kinase-like Gene Family AT1G70520 37.147 1.12e-128 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst6g00266 Pkinase 3.5e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00266 - - gmx:100801131 958.362