Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00265 ATGATGCTGCAACAACACCTCAAACTTGTACCCTTAACTCTCTTCATCTTGTGGAGCCTTGAGGGTGGTGCCCTAGGAGACCCTCAAACTCGTCTGCTCAACAAGGGGTGTAGCCAATACAACGCCTCGGATTTGACCAACTTCAACCAGAATCTAAACGCAACTCTGGACGACCTCAGGGTTCAAGTTAGCAACCAAAGCAAGCACTTTGCCACGGCTCAAGCAGCCAGAGGACAGAACCCTGTCTATGGCATGTTTCAATGTAGGAACTACCTCTCTACCAGTGACTGCGCCGCCTGCTTCTCCGTCGCCGCCTTCCAAATTCGCAACTGCTCCGCCGGAGCCAACGGTGCCCGTGTCATCTACGATGGTTGCTTCCTTAGGTATGAGAGCAGTGGCTTCTTTGACCAGACCACTCTGCCTGGCAACAGTATGACTTGTGGAAATCAGACAGCAGTTGGAGCCACTGATTTTAACACAACTGCACTGCAAGTGCTAATGGATCTGCAAATTGCAACCCCCAAAATCGCCGGTTTCTTTGCAGCTACCAAGACACAACTGGCTGGTGGTGCAATCTATGCCATTGCACAGTGTGCTGAAACTGTCTCAGAGAGTGGTTGTCTGGATTGCCTCACAGTTGGATACAACAACCTACGGATTTGTTTACCCAATACAGAGGGCAGAGCATTTGATGCTGGATGTTTTATGAGATACTCAGACACAGCCTTTTTTGCTGATAACCAGACCATTGATATCACACCCTTCTTGCAACAAGGCGGCTCAAGCAAGAAGGGAGCAATCATTGGTGGGGTTGTTGGAGGTGTAGGTCTTGTTGTGATCCTCCTTGCCCTATATGTCTTGTTTAAACGGTACAAGAAGCCCAAGGAGGTTCGAAGAGGTAACATATTGGGAGCAACTGAATTGAAAGGTCCAGTTTCCTACAGGTATAAGGATTTGAAGACTGCAACAGAAAATTTTAGTGATGAAAATAAACTGGGAGAAGGAGGTTTTGGAAATGTATACAAGGGAACTTTGAAAAATGGGAAAATAGTTGCGGTCAAGAAATTATTTCTAGGCCAATCCGGTAAGATGGATGAACAATTTGAAAGTGAAGTTAAGCTTATAAGCAATGTTCACCACAAGAATCTTGTTCGACTCCTTGGATGTTGCAGTAAAGGCCAAGAGAGAATCCTTGTTTATGAATACATGGCAAATAAAAGCCTGGATAGATTCTTATTTGGTGAACAAAAGGGTTCTCTCAACTGGAATCAAAGATATGTTATAATTTTAGGAACAGCAAAGGGTTTGGCCTATCTACATGAGGATTTCCACGTTTGCATCATACATAGGGATATAAAGACTAGCAATATCCTCTTGGATGATGAGATGCAACCAAGAATTGCTGATTTTGGATTGGCAAGACTTCTACCAGAGGACCAATCTCATCTCAGCACGAGATTTGCAGGAACATTGGGATACACAGCACCTGAGTATGCAATCCATGGTCAGTTATCAGAGAAGGCTGATGCATACAGCTTTGGTGTTGTAGTCCTAGAAATCATAAGTGGCCAAAAGAATAGTGAATTGAGGGAAGATGCTAATGGTGAATTCCTCCTTCGAAGGGCATGGAGGCTATATGAGGAAGACTTGCATTTGGAGTTGCTTGACAAGACCTTGAACCCTGAAGAATATGAGGTAGAAGAAGTGAAGAAAATCATAGAGATTGCTTTGCTTTGCACTCAAGCATCAGCTGGTGCAAGACCAACAATGTCTGAAATAGTAGCCTTACTCAAAAGCAAGAACTCAATTGGGCAAATTAGGCCTTCTATGCCTGTATTTGTTGAATCTAACTTGAGGACTCGGGCAACTGAAACCTCTACCTCAACTGGTTCCTCTACATCTAAGGCTACTTTTCGAGCTAAAGAAGGAAACAATGTGGAAAAAGGAGGGGATTTTTCTTCCACAATCTTGAAAGAGACAAATCTACTGAACAAGGGGTGCAGCGCATACAACGCATCCAACTTGCCTAGCTTCTTTGCCAATATCAATGAAACGTTTGCAAGCCTGAGAGCACAAATCAGCAGTGATCAGACCAAGCACTTTGCCATAGAAGATAAAGCCAGGGGAGAGGTGCTAACATATGCTATGTTTCGATGCAGAAACTATCTCTCTAATAGTGAATGTCTTACTTGTTTCAACACTGCCACCTCCCAAATTCGCAACTGCTCCGCTGCTAATGGCGCCAGAATCATATACGACTCCTGCTTCCTCAGGTTCTATGATGAAACCAATGAGCCTGGCGGTGGTGTGTCATGTGGGAACACGAGTTCAATTGTCACTGGTTTTAGAGTTGGTGTACAACAAGTGTTAATGGAGCTTCAGAAAGCAACACCAAAAATTGGACGTTTTTATGCAGCTACTAAGACACCGGTTGTTGGTGGTAGTGCAATTTATGCCGTTTCACAGTGTGTTGAAACTACCACAAAGGCTACGTGTCTGAAGTGTATGCAAGAGGTTCAAGAGCAAGAAGTGGGGACTGCATCAAACAAACGCATCTTTCCAACCCTTATCAAAAATATGGTGCAACTCAAGCTCCTAGACCTAACCTTGTTGGTTTTGTGGTCATGGTGGAGCTTAGAGAGTACAATAGGAGACCCTCAATTATTTTTCCTCAAATCGGATTGCAGCGGATTCATTGCACCCAACTTGGCAAACTTCAACCAAAATCTAAACGCGAGTTTGGATGATCTGACAGCACAGGTTAGCAACCAAAGCAAGCACTTTGCAACGGCTAAATCAACCACCGGAGCAGATCCTGTCTATGCCATGTTTCAATGCAGGAACTACCTCTCTATCACGGACTGCGCCACCTGCCTTGCCACCGCCACCGCCAAAATCCGCAACTGCTCCGCCGGAGTCAACGGTGCCCGTGTTATTTATGATGGCTGCTTCCTCAGGTACACCTCCATCCATTTACTATTTGATCAACCATCTATTTCTTACCATTCAGAATTGAATTTTCTGCATTCTTGGTGGAGGGCTAAAGTATTGGAATTTAGGGTTGAGAGGGAGCATTGGAATTTTGGCTCTGTTAGTGGCGGTGCTAATGGAGCAACGAGTTTTCTGAATTCTGCATCTCGTTCTCCTAGCTGTCCGGTTCGATCCGGTTCAACCAGTCCGATTGAACCGTTCGGTCCGATCCAGTTAAATAATCCAGTCTGGTTTGCGATCGGTTTGATTGAACCGTTGTGCAAGATCAGTCTGGTTGAACTCTGGTCCTGTTTGATTGAATCGACTAGGTACGAGAGCAATGACTTCTTTGACCAGATCATGCCTCGCAGCAGCATACTTTGTGGAAATCAGACTGCAAATGAAAGCACAGCTTTTAGTGCAGCTGGACAGCAAGTGCTAATGGATCTACAAACAGCAACACCAAAAATCACCGGCTTCTATGCTGCTACCAAGACACAAGTGGTTGGTGGTGCAATCTATGCCTTTGCACAATGTGCAGAAACTATCTCACAAAGTAATTGTTTGGATTGCTTGTCGGTTGAACGTAGCAGCATACAGGGTTGTCTTCCCTATACAAATGCTAGAGCTTTTGATGCTGGTTGCTTCATGAGATACTCGGAGTCACCTTTCTTTGCTGATAACCAAACCATTGATATCAGTCCCTTTTTGAAACAAGGCGGAAGTTCAAGCAAGAAGTGGGTCATTATTGGTGTTGTTGTTGGGGGTGCAGCCCTTGTTGTGATCCTTCTTTTATTATTCTCATGGTGTAGGAGACCCCAAAGTCCTAAGAGAGTTGCTAGAGGTAACATATTGGAAGCGACCGAGTTGAAAGGTCCAAAGAAATACAAGTATAGTGACTTGAAAGCTGCAACAAGAAATTTCAGTGAGAAAAATAAAGTAGGAGAAGGAGGCTTTGGCGCTGTATATAAGGGGACTATGAAAAATGGAAAAGTTATTGCAGTCAAAATATTAATTTCAGGAAAATCCAGCAAGATAAATGACGATTTTGAAACTGAAGTTACACTTATAAGTAATGTTCATCACAGAAATCTGGTTCGGCTTCTTGGTTGTTGCAGTAAAGACCAAGACAGAATACTTGTTTATGAATTCATGGCAAACAGCAGCCTTGACAATTTCTTATTTGGTAAAAGAAAAGGTTTTCTCAACTGGAAACAACGCTATGATATAATTTTGGGCACGGCAAGAGGATTGACCTATCTACATGAGGAATTTCATGTTACCATCATACATAGAGATATTAAGAGTGGCAATATCCTCTTGGATGAAGAACTGCAGCCCAAAATTTCTGATTTTGGTTTGGTGAAGCTCCTACCTGGGGACCAATCTCATCTTAGCACAAGATTTGCAGGGACAATGGGATACACAGCACCTGAGTATGCACTCAATGGTCAATTATCAGAAAAGGCTGATATATACAGCTACGGAATTGTGGTCCTAGAAATCATAAGTGGTCAAAAGAGTACTGATGTCAAGTGTGTGGATGATGATGCTGAAGATGAATACCTTCTTCGACGAGCATGGAAATTGTATGAGAGAGGCATGCAATTGGAGTTGGTGGACAAAAGCTTAAACCCTAATGACTATGATGCAGAAGAAGTGAAGAAAGTCATAGACATTGCTTTGTTATGCACTCAACCATCGTCTGCAACGAGGCCAGCCATGTCTGAAGTAGTAGCTCTACTCAGCAGTAATGACTTACTTGAGCACATGAGACCTACAATGCCTATCTTTATTGAGTCCAAGATAAGACCCCACAGAGATATCTTTGCCTCGACTGGTTCCTCTACATCTAATGGCACTGCCTCCAATTCTATTGTACCTGCTCAATGA 4863 0.4359 MMLQQHLKLVPLTLFILWSLEGGALGDPQTRLLNKGCSQYNASDLTNFNQNLNATLDDLRVQVSNQSKHFATAQAARGQNPVYGMFQCRNYLSTSDCAACFSVAAFQIRNCSAGANGARVIYDGCFLRYESSGFFDQTTLPGNSMTCGNQTAVGATDFNTTALQVLMDLQIATPKIAGFFAATKTQLAGGAIYAIAQCAETVSESGCLDCLTVGYNNLRICLPNTEGRAFDAGCFMRYSDTAFFADNQTIDITPFLQQGGSSKKGAIIGGVVGGVGLVVILLALYVLFKRYKKPKEVRRGNILGATELKGPVSYRYKDLKTATENFSDENKLGEGGFGNVYKGTLKNGKIVAVKKLFLGQSGKMDEQFESEVKLISNVHHKNLVRLLGCCSKGQERILVYEYMANKSLDRFLFGEQKGSLNWNQRYVIILGTAKGLAYLHEDFHVCIIHRDIKTSNILLDDEMQPRIADFGLARLLPEDQSHLSTRFAGTLGYTAPEYAIHGQLSEKADAYSFGVVVLEIISGQKNSELREDANGEFLLRRAWRLYEEDLHLELLDKTLNPEEYEVEEVKKIIEIALLCTQASAGARPTMSEIVALLKSKNSIGQIRPSMPVFVESNLRTRATETSTSTGSSTSKATFRAKEGNNVEKGGDFSSTILKETNLLNKGCSAYNASNLPSFFANINETFASLRAQISSDQTKHFAIEDKARGEVLTYAMFRCRNYLSNSECLTCFNTATSQIRNCSAANGARIIYDSCFLRFYDETNEPGGGVSCGNTSSIVTGFRVGVQQVLMELQKATPKIGRFYAATKTPVVGGSAIYAVSQCVETTTKATCLKCMQEVQEQEVGTASNKRIFPTLIKNMVQLKLLDLTLLVLWSWWSLESTIGDPQLFFLKSDCSGFIAPNLANFNQNLNASLDDLTAQVSNQSKHFATAKSTTGADPVYAMFQCRNYLSITDCATCLATATAKIRNCSAGVNGARVIYDGCFLRYTSIHLLFDQPSISYHSELNFLHSWWRAKVLEFRVEREHWNFGSVSGGANGATSFLNSASRSPSCPVRSGSTSPIEPFGPIQLNNPVWFAIGLIEPLCKISLVELWSCLIESTRYESNDFFDQIMPRSSILCGNQTANESTAFSAAGQQVLMDLQTATPKITGFYAATKTQVVGGAIYAFAQCAETISQSNCLDCLSVERSSIQGCLPYTNARAFDAGCFMRYSESPFFADNQTIDISPFLKQGGSSSKKWVIIGVVVGGAALVVILLLLFSWCRRPQSPKRVARGNILEATELKGPKKYKYSDLKAATRNFSEKNKVGEGGFGAVYKGTMKNGKVIAVKILISGKSSKINDDFETEVTLISNVHHRNLVRLLGCCSKDQDRILVYEFMANSSLDNFLFGKRKGFLNWKQRYDIILGTARGLTYLHEEFHVTIIHRDIKSGNILLDEELQPKISDFGLVKLLPGDQSHLSTRFAGTMGYTAPEYALNGQLSEKADIYSYGIVVLEIISGQKSTDVKCVDDDAEDEYLLRRAWKLYERGMQLELVDKSLNPNDYDAEEVKKVIDIALLCTQPSSATRPAMSEVVALLSSNDLLEHMRPTMPIFIESKIRPHRDIFASTGSSTSNGTASNSIVPAQ 1620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00265 1620 ProSiteProfiles Protein kinase domain profile. 326 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00265 1620 Coils Coil 907 927 - -
Spst6g00265 1620 CDD STKc_IRAK 332 598 - -
Spst6g00265 1620 ProSiteProfiles Gnk2-homologous domain profile. 140 243 IPR002902 -
Spst6g00265 1620 SMART serkin_6 326 603 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00265 1620 SMART serkin_6 1298 1578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00265 1620 Gene3D Phosphorylase Kinase; domain 1 1271 1374 - -
Spst6g00265 1620 ProSiteProfiles Protein kinase domain profile. 1298 1578 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00265 1620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1419 1431 IPR008271 GO:0004672|GO:0006468
Spst6g00265 1620 FunFam Cysteine-rich receptor-like protein kinase 2 1113 1214 - -
Spst6g00265 1620 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
Spst6g00265 1620 FunFam Cysteine-rich receptor-like protein kinase 2 1375 1580 - -
Spst6g00265 1620 MobiDBLite consensus disorder prediction 1600 1620 - -
Spst6g00265 1620 FunFam Cysteine-rich receptor-like protein kinase 2 1265 1374 - -
Spst6g00265 1620 Pfam Protein kinase domain 327 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00265 1620 Pfam Protein kinase domain 1298 1568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00265 1620 SUPERFAMILY Protein kinase-like (PK-like) 310 613 IPR011009 -
Spst6g00265 1620 Gene3D - 143 243 IPR038408 -
Spst6g00265 1620 Gene3D - 659 763 IPR038408 -
Spst6g00265 1620 Gene3D - 29 134 IPR038408 -
Spst6g00265 1620 Gene3D - 1113 1214 IPR038408 -
Spst6g00265 1620 Gene3D - 889 990 IPR038408 -
Spst6g00265 1620 FunFam Cysteine-rich receptor-like protein kinase 2 29 134 - -
Spst6g00265 1620 Pfam Salt stress response/antifungal 1118 1211 IPR002902 -
Spst6g00265 1620 Pfam Salt stress response/antifungal 904 988 IPR002902 -
Spst6g00265 1620 Pfam Salt stress response/antifungal 153 240 IPR002902 -
Spst6g00265 1620 Pfam Salt stress response/antifungal 37 131 IPR002902 -
Spst6g00265 1620 Pfam Salt stress response/antifungal 671 760 IPR002902 -
Spst6g00265 1620 ProSiteProfiles Gnk2-homologous domain profile. 887 992 IPR002902 -
Spst6g00265 1620 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 84 631 - -
Spst6g00265 1620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Spst6g00265 1620 ProSitePatterns Protein kinases ATP-binding region signature. 1304 1326 IPR017441 GO:0005524
Spst6g00265 1620 FunFam Cysteine-rich receptor-like protein kinase 2 291 402 - -
Spst6g00265 1620 ProSiteProfiles Gnk2-homologous domain profile. 1111 1214 IPR002902 -
Spst6g00265 1620 FunFam Cysteine-rich receptor-like protein kinase 2 403 605 - -
Spst6g00265 1620 SUPERFAMILY Protein kinase-like (PK-like) 1282 1589 IPR011009 -
Spst6g00265 1620 ProSitePatterns Protein kinases ATP-binding region signature. 332 355 IPR017441 GO:0005524
Spst6g00265 1620 CDD STKc_IRAK 1304 1572 - -
Spst6g00265 1620 Gene3D Transferase(Phosphotransferase) domain 1 1375 1582 - -
Spst6g00265 1620 Gene3D Transferase(Phosphotransferase) domain 1 403 608 - -
Spst6g00265 1620 ProSiteProfiles Gnk2-homologous domain profile. 660 764 IPR002902 -
Spst6g00265 1620 FunFam Cysteine-rich receptor-like protein kinase 2 887 992 - -
Spst6g00265 1620 FunFam Cysteine-rich receptor-like protein kinase 2 142 243 - -
Spst6g00265 1620 Gene3D Phosphorylase Kinase; domain 1 291 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00265 Spst-Chr6 2647944 2662657 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00265 858 986 Receptor kinase-like Gene Family AT1G70520 31.783 6.96e-12 68.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst6g00265 Pkinase 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00265 - - vra:106775622 1307.74