Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00253 ATGTCAAACCGAGTTTGCATGAAAAAGTGGTTGTTGACACCAATGGGTGTGAAGTTTGTGAGCAGACTGGAACACTCAACTCATTTTTCCATGTGTGTTCGATCCAAAACAACGTCTGCTCAGTATGTAGCATCGAGATTTCGAGACCCCACGTTTGAGAAACACATGGACAACTACAAGAACCTTGTCAAGGTCATTTACGTTCAAGACCTCATCCTTGCAAACCCAAAAAACCCATCAGTCTCCATTGATTTCCTGTCCAAGCTCTCCCAGAAGCTCCACCTAAACCGCGGAGCCATTGCATTCCTGCGCAAGTTTCCTCACATCTTCCACATTTACTATGATCATTCCAAGTTGAAGCCCTTTTGCAGGTTAACTGACGCTGCTCTTGGTATTACACGGCTGGAAGCGGAGGCCATCAATTCTTCTTTGCCTGTTGTTGTTGAAAGACTTGTTCGGATACTGTCCATGTCTGCATCCAGAATGGTGCCTCTTAGAGCTGTTTTTAAGGTTTGGAAGGAGCTTGGGCTGCCTGATGACTTCGAGGACTCAGTTATATATGCTAATTCTGGTGTTTTTCAACTGTCTGATGCGCATGAACAGAATACTCATTTGTTGAAGCTGGTTGGTGGTGTTTCCAGCAATGGCTTTAGGGCGGCTGTCGAGGATTGGAGGGTTGTTGAGTGCTGCAAGGAGGACTGCAGTGTTGATAGGATGGAAATGCAGTTCAGTTTCAGACATGGGTATCCTCCGGGAATGAGGTTGAGCAAGAATTTCAAGGCCAAGGTGAAAGAGTGGCAGAAGTTACCATATGTGGGGCCTTATGAAGTGCTGGGTGAGAAGAAGTCTAAGGCTGGAATGATGGCCATGGAGAAGCGAGCAGTGTCGATTGTTCATGAGTTCCTGAGTTTGACAGTGGAGAAGATGGTGGAAGTTGAGAAGATCAGCCAGTTTAGGAAATGGTTTGGGATTGATTTAAATATAAGGGATCTCTTCTTGGACCACCCAGGGATCTTCTATTTGTCAACTAAGGGTAAAAGACATACTGTTTTCCTGAGGGAAGCTTATGAACGAGGGCGTTTGGTAGAACCAAATCCTGTCTATGATGCAAGAAGACGGCTACTTGATCTTGTTGTTTTAGGACGTCGGGGTCTGCCAGCTGTTAATTCAAAGTTGCAGGATTCAAGCAGCTGCAATGAGGTTAGGCGGGAGGAAAACCCGAAAAGACATGATTTGTCACCATCTTGA 1248 0.4559 MSNRVCMKKWLLTPMGVKFVSRLEHSTHFSMCVRSKTTSAQYVASRFRDPTFEKHMDNYKNLVKVIYVQDLILANPKNPSVSIDFLSKLSQKLHLNRGAIAFLRKFPHIFHIYYDHSKLKPFCRLTDAALGITRLEAEAINSSLPVVVERLVRILSMSASRMVPLRAVFKVWKELGLPDDFEDSVIYANSGVFQLSDAHEQNTHLLKLVGGVSSNGFRAAVEDWRVVECCKEDCSVDRMEMQFSFRHGYPPGMRLSKNFKAKVKEWQKLPYVGPYEVLGEKKSKAGMMAMEKRAVSIVHEFLSLTVEKMVEVEKISQFRKWFGIDLNIRDLFLDHPGIFYLSTKGKRHTVFLREAYERGRLVEPNPVYDARRRLLDLVVLGRRGLPAVNSKLQDSSSCNEVRREENPKRHDLSPS 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00253 415 MobiDBLite consensus disorder prediction 397 415 - -
Spst6g00253 415 MobiDBLite consensus disorder prediction 396 415 - -
Spst6g00253 415 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 33 392 IPR045040 GO:0003723
Spst6g00253 415 Pfam Plant organelle RNA recognition domain 48 382 IPR021099 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00253 Spst-Chr6 2584351 2585598 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00253 - - gmx:100808404 709.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00253 6 2584351 2585598 Spst6g00253 6 2584351 2585598 ECH
Spst6g00253 6 2584351 2585598 Spst10g00018 10 204827 206571 PCT