Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00237 ATGCAGCTCCAATTTGATTCTCAGTTTTTCATGTCTATTGTGTTTCTTGGTTTTGGTGGGTTGTTATGTTATTTGTACACTTCCTTTGTGGACAAGCCAAATAGGCTTCGTTCTAAGCTAGTGAAGCAAGGAATCAATGGTCCACCTCCAACCATACTGCTTGGAAATATTTTGGAGATAAAGAAGGCTCGCTCTAACAATTCAAAGTCTTCTTCTTCTGGAGCCCCTACCTCTCACAACTGTGCTGGTCTTCTCTTTCCATTGTTTGATCAATGGAGGGAACAATATGGTCAAGTGTTCATGTTTTCTCTTGGAACCATACAAATACTGTCCGTAAACCAACCTGACATAGTGAAAGACGTCACTGTATGCACATCCTTGGACTTGGGGAAGCCTGCATATCAACTTAAACAACTAGGGCCTTTGGTGGGTGAAGGCATTTTATCTTCAAATGGGTCTAGATGGGTTCATCAAAGAAAGATTCTAGCTCCGGAGCTATACATGGAAAAGGTTAAGGGAATGATGAATATAATTAGCGAGTCTGCTGTATCTATGCTAAACTTGTGGAATGATAGAATAGAAGCAGAAGGTGGAGTTGCTGACGTAAAAATTGATGAGTGCATGAGAAATTTCTCAGGGAATGTTATTTCAAAAGCATGCTTTGGAAGCAATTATGCCAAAAGGGAAGAAATTTTCTTGAAACTCACAGCTCTCCAAGAGTTATTGTCCTGGAAAAACGTATCCAGACGTATCCCTGGCATGAGCCACCTTCCAACAAAGACCAATAGAGAAATATGGAGATTAGAAAAAGAGGTGAAAGCAATGATACTTCAGGTGGTGAAGGAAAGAAAGGAAAGAAAGGAAACTGCTTTTGAGAAGGACTTGCTGCAAATGGTTCTTGAAGATGCTACGAATAGTAACCTTAGTAAAGAGGCCATTGACAGTTTTATTGTTGATAACTGCAAGAATATATACTTGGCAGGCTATGAGACCACTGCAGTTTCAGCTGTATGGTGCCTGATGCTGCTGGCCTCAAACCAAGATTGGCAAGATCGTGTTCGAGCTGAGGTGCTAGAAATTTGCAAGGGTAGAATCCCAGATTTTAGTATGCTTGGTAAGCTGAAGCAGCTGGCAATGGTTATTCACGAAGCGTTGCGCCTTTATCCTCCTGTGACTGTTGTGTCAAGAGAGGCCTTCAAGGACATGAAATTTGGGAATCTTGACGTTCCCAAGGGGTTTAACCTTTGGATAATGGTAGCAAGTTTGCATACAAATCCAGATATCTGGGGAGATGATGCCTACAAATTCAAGCCAGAAAGATTTGCCAATGGAACTTCAGGTTCTTGTAAGCTGCCACATGTGTACATGCCCTTTGGGGTTGGTCCACGAGTGTGTCTTGGACAGAACTTGGCCATTATTGAACTTAAGATGCTCATAGCTCTCATGGTGTCCAAGTTCACTTTCTCCCTCTCTCCACACTACGTTCATTCGCCTACTCTTAGGTTGCTCATAGAGCCCGAGCATGGAGTCAATATCTTGGTGAAAAAACTATGA 1554 0.4208 MQLQFDSQFFMSIVFLGFGGLLCYLYTSFVDKPNRLRSKLVKQGINGPPPTILLGNILEIKKARSNNSKSSSSGAPTSHNCAGLLFPLFDQWREQYGQVFMFSLGTIQILSVNQPDIVKDVTVCTSLDLGKPAYQLKQLGPLVGEGILSSNGSRWVHQRKILAPELYMEKVKGMMNIISESAVSMLNLWNDRIEAEGGVADVKIDECMRNFSGNVISKACFGSNYAKREEIFLKLTALQELLSWKNVSRRIPGMSHLPTKTNREIWRLEKEVKAMILQVVKERKERKETAFEKDLLQMVLEDATNSNLSKEAIDSFIVDNCKNIYLAGYETTAVSAVWCLMLLASNQDWQDRVRAEVLEICKGRIPDFSMLGKLKQLAMVIHEALRLYPPVTVVSREAFKDMKFGNLDVPKGFNLWIMVASLHTNPDIWGDDAYKFKPERFANGTSGSCKLPHVYMPFGVGPRVCLGQNLAIIELKMLIALMVSKFTFSLSPHYVHSPTLRLLIEPEHGVNILVKKL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00237 517 SUPERFAMILY Cytochrome P450 80 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 Pfam Cytochrome P450 87 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PRINTS E-class P450 group I signature 211 229 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Spst6g00237 517 Gene3D Cytochrome P450 33 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PANTHER CYTOCHROME P450 FAMILY MEMBER 36 509 - -
Spst6g00237 517 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00237 517 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00237 Spst-Chr6 2470181 2472791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00237 117 514 Cytochrome P450 AT5G24900 44.963 8.89e-129 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00237 K24544 - gmx:100785420 842.032