Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00224 ATGCTTCTTCATTTTCTGTTTCATTTCTCTGAATTGGCGAATTTGAGACTAACGTATGCTTCTGAACTCTCCCATGCTTCCTTTCAGGAAAATATGAAGGCTGGCAAAGTTTACTCCGAATTTAATTGCCAATATATTATTCCTTGCAGAAAACAACTCTCCATGAAGTTCGATTCTACTTCAGTGGCCTTTTTCCTTTTTTTCATAGTTATTCTTTTTCCTTTGGCTATTGCTGATCTAAGTTCAGATAAGCAAGCCCTTCTGGATTTTGCTAATGCTCTTCCCCACCGGAGAAACCTTATGTGGAATCCATCCACCTCAGTCTGTACATCTTGGGTAGGCATCACTTGCAATGAAAATCGAACTCGTGTTGTTAATGTCCGGCTCCCTGGAGTTGGTCTAGTTGGCACCATCCCATCCAATACACTAGGCAAGCTTGATGCTGTGAAAATTATTAGCCTTCGTTCCAACCTACTCAGTGGAAATCTCCCTTCTGACATTGCTTCTCTTCCTTCTCTTCAGTATCTCTACCTCCAGCATAATAACCTTTCTGGTGATATACCTGCCTCATTGTCTCCCCATTTTGTTGTACTTGATTTGTCATATAATTCTTTCTCTGGTGGCATTCCGAGGACATTTCAAAATTTGTCATACTTAACTAGTTTGAATCTCCAGAACAACTCTCTATCTGGACAGATACCTAATCTCAATGTCACTCAGCTCAGGCTTTTGAATTTAAGCTACAACCATTTTAATGGTTCTATTCCTAAAGCTCTTCAGATTTTTCCAAATTCTTCCTTTGAAGGAAACTCACTTTTATGCGGACCCCCTCTAAAGCCATGCTCTGTGGTTCCTCCTACACCTTCTCCTGCTTCGACTCCAACTCCATCATCAACTCCAGGGAGACGAAACTCAAAAATCAAGTTGAGTAAAATAGCTATCATTGCAATTGCTGTTGGAGGAGCTGTGGTGCTATTCTTCATAGCTCTTGTTATTGTTATTTGCTGTATAAAGAAGGAAGATGGCAGAGGCTCCAATGTAACTAAAGGGAAGGGTTCTAGTGGTGGTAGGGGTGAGAAGCCAAAAGAAGAGTTTGGAAGTGGGGTTCAAGAACCTGAGAAGAACAAGTTGGTTTTCTTTGAGGGAAGTTCTTACAATTTTGATCTTGAAGATTTGCTGAGAGCTTCAGCTGAAGTCCTGGGAAAGGGTAGTTATGGTACTGCATATAAGGCCATCCTGGAGGAGTCAATGACTGTTGTGGTGAAAAGATTGAAAGAAGTTGTGGTAGGGAAGAAGGACTTTGAACAGCAGATGGACGGTATGGGAAGGGTTGGACAACACACAAATGTTGTCCCACTGCGTGCTTATTATTATTCAAAAGATGAAAAGCTTTTGGTGTATGACTATATCCCGGGTGGCAACCTACACACACTCTTGCATGGTGGAAGGACAGGTGGAAGAACTCCATTAGATTGGGACTCCCGAGTAAAAATATCCCTTGGAACTGCCAAAGGACTAGCCCACATTCATTCTGTTGGTGGTCCCAAATTCACACATGGAAATATTAAGTCCTCAAATGTCCTCCTCAACCAAGATAATGATGGCTGCATTTCTGATTTTGGCCTCGCCCCCCTTATGAATGTTCCTGCTACCCCTTCTAGAGCTGCTGGTTATCGTGCTCCTGAGGTGATTGAAACTCGTAAACACTCCCATAAATCGGATGTGTATAGCTTCGGTGTCCTCCTTCTTGAGATGCTTACTGGGAAGGCTCCTCTCCAATCTCCTGGACGTGATGATATGGTTGATCTCCCTAGGTGGGTTCAGTCTGTTGTTAGGGAAGAATGGACTGCCGAAGTTTTTGATGTTGAGCTTATGAGGTACCAAAACATTGAAGAAGAAATGGTGCAAATGTTGCAAATTGCCATGGCCTGTGTGGCAAAGATGCCAGATATGAGACCTAGTATGGATGAAGTAGTGAGAATGATTGAAGAGATCCGGCAATCTGACTCAGAGAACCGACCATCTTCTGAAGAAAATAAATCCAAGGACTCAAATGTTCAGACTCCATAG 2070 0.4251 MLLHFLFHFSELANLRLTYASELSHASFQENMKAGKVYSEFNCQYIIPCRKQLSMKFDSTSVAFFLFFIVILFPLAIADLSSDKQALLDFANALPHRRNLMWNPSTSVCTSWVGITCNENRTRVVNVRLPGVGLVGTIPSNTLGKLDAVKIISLRSNLLSGNLPSDIASLPSLQYLYLQHNNLSGDIPASLSPHFVVLDLSYNSFSGGIPRTFQNLSYLTSLNLQNNSLSGQIPNLNVTQLRLLNLSYNHFNGSIPKALQIFPNSSFEGNSLLCGPPLKPCSVVPPTPSPASTPTPSSTPGRRNSKIKLSKIAIIAIAVGGAVVLFFIALVIVICCIKKEDGRGSNVTKGKGSSGGRGEKPKEEFGSGVQEPEKNKLVFFEGSSYNFDLEDLLRASAEVLGKGSYGTAYKAILEESMTVVVKRLKEVVVGKKDFEQQMDGMGRVGQHTNVVPLRAYYYSKDEKLLVYDYIPGGNLHTLLHGGRTGGRTPLDWDSRVKISLGTAKGLAHIHSVGGPKFTHGNIKSSNVLLNQDNDGCISDFGLAPLMNVPATPSRAAGYRAPEVIETRKHSHKSDVYSFGVLLLEMLTGKAPLQSPGRDDMVDLPRWVQSVVREEWTAEVFDVELMRYQNIEEEMVQMLQIAMACVAKMPDMRPSMDEVVRMIEEIRQSDSENRPSSEENKSKDSNVQTP 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00224 689 Pfam Leucine rich repeat 137 183 IPR001611 GO:0005515
Spst6g00224 689 MobiDBLite consensus disorder prediction 355 369 - -
Spst6g00224 689 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 470 677 - -
Spst6g00224 689 CDD STKc_IRAK 400 665 - -
Spst6g00224 689 MobiDBLite consensus disorder prediction 663 689 - -
Spst6g00224 689 Pfam Leucine rich repeat N-terminal domain 81 118 IPR013210 -
Spst6g00224 689 FunFam Leucine-rich repeat receptor-like protein kinase 193 281 - -
Spst6g00224 689 Gene3D Ribonuclease Inhibitor 81 193 IPR032675 -
Spst6g00224 689 MobiDBLite consensus disorder prediction 663 680 - -
Spst6g00224 689 SUPERFAMILY L domain-like 82 281 - -
Spst6g00224 689 MobiDBLite consensus disorder prediction 344 369 - -
Spst6g00224 689 FunFam pollen receptor-like kinase 1 362 469 - -
Spst6g00224 689 Pfam Protein kinase domain 397 660 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00224 689 Gene3D Phosphorylase Kinase; domain 1 362 469 - -
Spst6g00224 689 Gene3D Ribonuclease Inhibitor 194 282 IPR032675 -
Spst6g00224 689 ProSiteProfiles Protein kinase domain profile. 394 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00224 689 PANTHER OS05G0588300 PROTEIN 65 677 - -
Spst6g00224 689 FunFam Leucine-rich repeat receptor-like protein kinase 82 192 - -
Spst6g00224 689 Pfam Leucine Rich Repeat 197 216 IPR001611 GO:0005515
Spst6g00224 689 Gene3D Transferase(Phosphotransferase) domain 1 470 688 - -
Spst6g00224 689 SUPERFAMILY Protein kinase-like (PK-like) 398 672 IPR011009 -
Spst6g00224 689 MobiDBLite consensus disorder prediction 284 303 - -
Spst6g00224 689 ProSitePatterns Protein kinases ATP-binding region signature. 400 431 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00224 Spst-Chr6 2265269 2269161 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00224 54 687 Receptor kinase-like Gene Family AT5G58300 67.293 0.0 856
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst6g00224 Pkinase 1.6e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00224 - - gmx:100796171 1140.95