Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00213 ATGGCAGGGGCCAATGTTGTTCTATTGGATTTCTGGCCCAGCTCTTATGGAATGAGAGTGAAAATCGCTTTGGCAGAGAAGGGAATCTCGTATGATTGCAAGCAAGAAGACTTTGGAGCTAAAAGCTCTCTGCTTCTAGAGATGAACCCGGTTCACAAAATGATACCAGTTTTGATTCACAATGCAAAACCCATCTGTGAGTCACTCAATATTGTTCAGTACATTGATGAGGCATGGAACCACAAGCCCTCTCTGCTTCCCTCTGACCCTTACAAACGATCCCAAGCCAGGTTTTGGGGCGATTACATTGACAAAAATGTATACAATTCTATAAAGAGGATATGGACGGGGAAGGGTGACCAAGAAGAGTGCAAGAAACAATTCATAGAGTGCTTGAAGACCCTGAAAGATGAACTTGGAGACAAACCATATTTTGGTGGTGAAGAATTTGGGTATGTGGATGTGGCTCTTGTTCCCTTCACTAGCTGGTTTTACACGGTTGAGACATGCGGAAAACTAAGCATTGATGAAGAGTGTCCGAAACTTGTGGCGTGGGTCAAGAGGTGCATGCAGAAAGAGAGTGTGGCCACGGCACTCCCTCACCCTCACCGGATCTATGCTTTTGCCCTGCAATATAAACAGACACATGGAGTTGAGTAG 660 0.4515 MAGANVVLLDFWPSSYGMRVKIALAEKGISYDCKQEDFGAKSSLLLEMNPVHKMIPVLIHNAKPICESLNIVQYIDEAWNHKPSLLPSDPYKRSQARFWGDYIDKNVYNSIKRIWTGKGDQEECKKQFIECLKTLKDELGDKPYFGGEEFGYVDVALVPFTSWFYTVETCGKLSIDEECPKLVAWVKRCMQKESVATALPHPHRIYAFALQYKQTHGVE 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00213 219 Gene3D - 89 219 - -
Spst6g00213 219 SFLD Main.3: Omega- and Tau-like 3 216 IPR045073 -
Spst6g00213 219 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Spst6g00213 219 Gene3D Glutaredoxin 2 88 - -
Spst6g00213 219 Pfam Glutathione S-transferase, C-terminal domain 122 188 - -
Spst6g00213 219 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Spst6g00213 219 FunFam Glutathione S-transferase U20 89 219 - -
Spst6g00213 219 SFLD Glutathione Transferase (cytosolic) 3 216 IPR040079 -
Spst6g00213 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Spst6g00213 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 208 IPR010987 -
Spst6g00213 219 FunFam Tau class glutathione S-transferase 1 88 - -
Spst6g00213 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 9 206 IPR045073 -
Spst6g00213 219 CDD GST_N_Tau 6 79 - -
Spst6g00213 219 CDD GST_C_Tau 90 212 IPR045074 GO:0004364|GO:0006749
Spst6g00213 219 Pfam Glutathione S-transferase, N-terminal domain 6 77 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00213 Spst-Chr6 2170465 2171431 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00213 5 219 Glutathione S-transferase Gene Family AT1G17180 58.333 4.47e-94 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00213 K00799 - gmx:100527221 410.223