Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00209 ATGCAGGAACTTATGCTTGGAGGAGCAGACAATCCATCCAATGCAGTTGAGTGTGCACTTGCAGAAATGATAAATCAGCCATATAAACTTCAGCAAGCTACTGAAGAAGTAGACAAGGTTGTAGGTAAGCAAAGGATGGTGCAAGAATCAGATATTCCAAAGCTCAATTATGTAAAAGCTTGTCTGAGAGAAGCTTTTCGCCTTCATCCTGTTGTGCCTTTTAATCCACCTCATGTCTCAACCATTGACACAATGGTGGCAAACTATTTTATTCCAAAGGGTAGCCATGTACTTCTAAGCAGACATGAACTTGGACGAAATCCTAAAGTGTGGAGTGAACCTCACAAGTTCAAACCTGAACGCCACCAAAAGAATGATGGATCTGTGGTTGTCTTGTCAGAGCCAGATTTAAAGTTCATATCATTTGGCACAGGAAGGCGAGGTTGTCCTGCAGTCGTACTTGGCTCCACAATGGCAGTGATGTTATTGGGTAGGTTGATCCATGCCTTTTCTTGGACTGCACCTCCAAATGTATCAAGTATCAACCTTAAGTCTAATAATGGTGGTATGCTTGATGAACCACTTGTGTTAGAAGCCAAACCAAGATTAGCACCAGAGTTGTATTACATATAA 633 0.4171 MQELMLGGADNPSNAVECALAEMINQPYKLQQATEEVDKVVGKQRMVQESDIPKLNYVKACLREAFRLHPVVPFNPPHVSTIDTMVANYFIPKGSHVLLSRHELGRNPKVWSEPHKFKPERHQKNDGSVVVLSEPDLKFISFGTGRRGCPAVVLGSTMAVMLLGRLIHAFSWTAPPNVSSINLKSNNGGMLDEPLVLEAKPRLAPELYYI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00209 210 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 142 151 IPR017972 GO:0005506|GO:0016705
Spst6g00209 210 PRINTS E-class P450 group I signature 16 42 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00209 210 PRINTS E-class P450 group I signature 59 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00209 210 PRINTS E-class P450 group I signature 100 124 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00209 210 PRINTS E-class P450 group I signature 139 149 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00209 210 PRINTS E-class P450 group I signature 149 172 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00209 210 Gene3D Cytochrome P450 1 203 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00209 210 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 2 210 - -
Spst6g00209 210 SUPERFAMILY Cytochrome P450 3 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00209 210 Pfam Cytochrome P450 3 187 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00209 Spst-Chr6 2135942 2136574 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00209 1 208 Cytochrome P450 AT5G05260 57.895 1.32e-81 250
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00209 - - pvu:PHAVU_006G0792000 379.793