Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00206 ATGAAGGAGCTTATAACAGTGACCCTTCACGTGTTATTCACTGATCCATTTTCAATTACAAAAAGCCTTCTCCAAACCATGGGTCACACCCCTTTTTTTCTGTTGTCAAATCTTCAAAGCTTTTGGCCTTCTTTGTTTGTTATAATCACTTGCTTCACCATTGTCATCAAAACCCTAAGGTCTAACTTCATCGAGAATTATTCCAAGAGACAAAAGCGAAACCTTCCCCCTGGTCCCAAACCATGGCCTATAGTTGGCAACCTTCCTGAAATGCTTGCAAACAAACCTGTGTATAAGTGGATACACAGCCTCATGAAAGAAATGAACACTGAAATTGCATGTATCCGCTTAGGAAATTCCTATGTTATCCCAGTCACATGTCCCACCATTGCTAGTGAGTTCTTGAGAAAACAAGATGCAACTTTTGCATCAAGATCACTAAGCATGTCCTCTGAACTCCTCTCAGGTGGATATTCAACCACAATTTTTGTGCCCTTTGGGGACCGGTGGAAGAAAATGAAGAAAATCATAACCAATGATTTGCTTTCTCCACACAAGCACCTATGGCTTCATGACAAAAGGACTGAAGAAGCTGACAACCTTATGTTTTACGTCTACAACAAGTGCAAAATGGTGAACGATGGTGTTTCTGGCCTTGTCAATGTTAGGAGTGCTTCAAGGCTTTATTGTGGAAACCTTATCAGAAAAATTACTTTTAATACAAGGTATTTTGGGAAGGGTAGAGAGGATGGAGGACCTGGTTTTGAGGATGTAGAGCATGTTGATACCCTCTTTGATTTGCTCAACTACATTTATGCCTTTTCTGTTTCTGATTATATGCCATGCTTGAGGGGACTTGACTTGGATGGCCAAGTGAAGAAAATGAAGGAAGCTTTGAGGATCGTCAAGAAGTACCATGACCCCATCGTTCAACAGAGAATCAAACAATGGAATGATGGATTGAAGGTTGATGCAGAGGACTGGCTTGATGTTCTGATCTCTCTGAAAGATGCCGACAATAACCCATCGTTAACATTGGAAGAGATCAATGCGCAAATCATAGAATTGATGCTTGCAACGGTGGACAATCCATCAAATGCTTTTGAATGGGCCCTCGCTGAGATGATAAACCAACCTGAGTTGCTCCATCGAGCTGTTGAAGAATTGGACAGTGTGGTAGGAAAAGACAGGCTGGTCCAAGAATCAGACATACCAAAACTCAACTATGTGAAGGCTTGTGCAAAAGAAGCTTTTCGCCTTCATCCCATTGCTCCTTTTATTCCTCCCCATGTCTCTATGAGTGACACAATGGTGGGAAATTACTTCATCCCAAAGGGTAGCCATGTGATTCTAAGCAGACAAGAACTTGGAAGAAACCCAAAAGTGTGGAATGAACCCTACAAGTTCAAACCTGAACGTCACATCAAGAGTGATGGATCTGATGTAGTGTTAACAGAGCCACATTTGAAGTTCATATCATTTAGCACTGGAAGGCGTGGCTGTCCTGGTGTGATGCTTGGAACCACAATGACAGTGATGCTATTTGCTAGATTGCTCCATGGATTCACTTGGAGTGCACCACCCAATGTTTCAACGATCAACCTTGCTGAGTCAGAAAATGATATCCTTCTTGCACAACCACTTCTGGCAATTGCTAAGCCAAGATTAGCACCAAATCTATACCAACTCTAG 1692 0.4202 MKELITVTLHVLFTDPFSITKSLLQTMGHTPFFLLSNLQSFWPSLFVIITCFTIVIKTLRSNFIENYSKRQKRNLPPGPKPWPIVGNLPEMLANKPVYKWIHSLMKEMNTEIACIRLGNSYVIPVTCPTIASEFLRKQDATFASRSLSMSSELLSGGYSTTIFVPFGDRWKKMKKIITNDLLSPHKHLWLHDKRTEEADNLMFYVYNKCKMVNDGVSGLVNVRSASRLYCGNLIRKITFNTRYFGKGREDGGPGFEDVEHVDTLFDLLNYIYAFSVSDYMPCLRGLDLDGQVKKMKEALRIVKKYHDPIVQQRIKQWNDGLKVDAEDWLDVLISLKDADNNPSLTLEEINAQIIELMLATVDNPSNAFEWALAEMINQPELLHRAVEELDSVVGKDRLVQESDIPKLNYVKACAKEAFRLHPIAPFIPPHVSMSDTMVGNYFIPKGSHVILSRQELGRNPKVWNEPYKFKPERHIKSDGSDVVLTEPHLKFISFSTGRRGCPGVMLGTTMTVMLFARLLHGFTWSAPPNVSTINLAESENDILLAQPLLAIAKPRLAPNLYQL 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00206 563 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 494 503 IPR017972 GO:0005506|GO:0016705
Spst6g00206 563 Gene3D Cytochrome P450 67 557 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 CDD CYP79 110 556 - -
Spst6g00206 563 Pfam Cytochrome P450 76 547 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 PRINTS E-class P450 group I signature 229 247 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 PRINTS E-class P450 group I signature 130 151 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 PRINTS E-class P450 group I signature 411 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 PRINTS E-class P450 group I signature 501 524 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 PRINTS E-class P450 group I signature 491 501 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 PRINTS E-class P450 group I signature 368 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 PRINTS E-class P450 group I signature 452 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 SUPERFAMILY Cytochrome P450 76 555 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst6g00206 563 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 49 562 - -
Spst6g00206 563 FunFam Cytochrome P450 9 68 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00206 Spst-Chr6 2059371 2063337 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00206 19 561 Cytochrome P450 AT4G39950 52.390 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00206 - K14984 gmx:100809902 958.747