Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00205 ATGTTGGAGGAAGTTGCTGAAACCCTACTAAGCACTTCGTCATGTAGTGCAAGATTGCATTCTTATAGGGGTTTTGCTGGTACTTTTGTTGTTGTGCAGTCGAGGAGAAAAGTTAGAGAGCCAAAGGAGGAAACCGTGACTCTGGGTCCAGCTGTTAGAGATGGCGAACACGTCTTTGGTGTCGCTCGCATATTTGCCTCCTTCAATGACACTTTCATTCATGTTACTGATTTATCTGGGAGGGAAACCCTTGTCCGCATCACTGGTGGAATGAAGGTTAAAGCTGACAGAGATGAATCATCTCCATATGCTGCTATGCTTGCAGCACAGGATGTTGCTGCCAGATGCAAGGAACTGGGCATAACTGCACTTCATATTAAGCTCCGTGCAACTGGAGGAAACAAGACCAAAACACCTGGTCCTGGTGCTCAATCAGCTCTTAGGGCCCTTGCTCGTTCAGGAATGAAAATTGGTCGTATAGAGGACGTGACGCCCATTCCTTCGGATAGCACTCGTAGAAAGAGTGGTAGAAGAGGTAGAAGGCTCTAA 549 0.4699 MLEEVAETLLSTSSCSARLHSYRGFAGTFVVVQSRRKVREPKEETVTLGPAVRDGEHVFGVARIFASFNDTFIHVTDLSGRETLVRITGGMKVKADRDESSPYAAMLAAQDVAARCKELGITALHIKLRATGGNKTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKSGRRGRRL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00205 182 MobiDBLite consensus disorder prediction 162 182 - -
Spst6g00205 182 Pfam Ribosomal protein S11 60 178 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g00205 182 Hamap 30S ribosomal protein S11 [rpsK]. 35 179 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g00205 182 FunFam 40S ribosomal protein S14 31 182 - -
Spst6g00205 182 PANTHER 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11 35 175 IPR001971 GO:0003735|GO:0005840|GO:0006412
Spst6g00205 182 Gene3D Ribosomal protein S11 33 182 IPR036967 GO:0003735|GO:0005840|GO:0006412
Spst6g00205 182 ProSitePatterns Ribosomal protein S11 signature. 147 169 IPR018102 -
Spst6g00205 182 SUPERFAMILY Translational machinery components 55 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00205 Spst-Chr6 2052645 2055892 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00205 34 171 Cytoplasmic Ribosomal Protein Gene Family AT3G11510 90.580 5.55e-91 260