Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00202 ATGTGTTTGCAACGTGGGGAGGAAGAAAGACGAGAGAGATTGCGCGTTTTTGTGTTAGAAACAGAGCATCGATCGGAAAAGAGCAGAACTCAGAAGAGAATGGCCACGCAGACGCATGATTCACCTCCAAACCCTAACCCTAATCCCAATGCCACGTCATCAACGCCGTCTTCTTCCTTGTTTTTCGGAGGCGCCAGTTCTTCCGCCGCTCCCGTCGCCGGCTCCGGCGAGTCCCACTCCAATCACCGGAGAGCGCTCTCGGAGGTCAGTTACCGGCTGCCGGAAGACATGATGGACCTCTCGCAGTCGGATCCGTTCAACGGCGGATCCTCGACCGCGAGCCTGGAGGAGATCGGATCCGAGGACGACTTGTTCTCCACCTACATTGACGTCGAGAAGCTCGGCGGTGGCGTGAACGGTGGCGCCCGCGGCGGAAACGGATCGGATCAGAGCGGTTACGGAAACGGCGCCGGTACTAGTGGCCACAATGATGGCGAGAAGAGTCCGAGCCCCGCCACGGCGCGGCCGAGACACCGACACAGTAGCTCCGTCGACTGTTCCACGTCAACGAGCATGTTCGGAGAGATCATGGAGGCGAAGAAAGCAATGCCTCCTGATAAGCTCGCGGAACTTTGGAACATTGATCCAAAGCGTGCCAAGAGAATACTAGCTAATAGGCAATCTGCTGCCCGTTCAAAAGAACGAAAGGCACGCTATATACAAGAACTTGAGCGCAAAGTGCAGACCCTTCAGACAGAAGCAACAACACTCTCTGCCCAACTTACATTGTACCAGAGGGATACAACTGGTCTGAGTAGCGAAAATACAGAGCTTAAGCTCCGTCTGCAAGCCATGGAGCAGCAAGCGCAACTTCGTGATGCTCTTAACGATGCATTGATGAAGGAAGTTGAGAGGCTTAAGATTGCTACTGGAGAGGCATTGAACAACCACTCCGAGTCTTTCAACATTGGAATGAACCAGATGTCATTTGCAGGGTCAAATTTCTTTTCAATCCCACCACATTCAGGCCCTCCTAACCAGAGCATGCACTTACCTCCATTTGGTCACACCCCATCTAGCATGCCAGTTCATCAGCTGCAACAAACAAATTCTCACCAAATCTCAGATATATTGCAAAACGATCAACTTGGTCGTTTGCAGGGACTTGACATTAGTAGTAGCAAAGGATCACCGATTGTGAAATCTGAAGGCCCCTCGATGTCTGCAAATGAGAGTAGCACTACGTTTTGA 1251 0.5204 MCLQRGEEERRERLRVFVLETEHRSEKSRTQKRMATQTHDSPPNPNPNPNATSSTPSSSLFFGGASSSAAPVAGSGESHSNHRRALSEVSYRLPEDMMDLSQSDPFNGGSSTASLEEIGSEDDLFSTYIDVEKLGGGVNGGARGGNGSDQSGYGNGAGTSGHNDGEKSPSPATARPRHRHSSSVDCSTSTSMFGEIMEAKKAMPPDKLAELWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEALNNHSESFNIGMNQMSFAGSNFFSIPPHSGPPNQSMHLPPFGHTPSSMPVHQLQQTNSHQISDILQNDQLGRLQGLDISSSKGSPIVKSEGPSMSANESSTTF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00202 416 Coils Coil 233 260 - -
Spst6g00202 416 MobiDBLite consensus disorder prediction 338 366 - -
Spst6g00202 416 Pfam bZIP transcription factor 217 275 IPR004827 GO:0003700|GO:0006355
Spst6g00202 416 MobiDBLite consensus disorder prediction 1 34 - -
Spst6g00202 416 MobiDBLite consensus disorder prediction 51 75 - -
Spst6g00202 416 SUPERFAMILY Leucine zipper domain 217 268 IPR046347 GO:0003700|GO:0006355
Spst6g00202 416 MobiDBLite consensus disorder prediction 144 167 - -
Spst6g00202 416 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 215 278 IPR004827 GO:0003700|GO:0006355
Spst6g00202 416 MobiDBLite consensus disorder prediction 1 83 - -
Spst6g00202 416 Gene3D - 216 268 - -
Spst6g00202 416 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 39 393 - -
Spst6g00202 416 MobiDBLite consensus disorder prediction 388 416 - -
Spst6g00202 416 FunFam probable transcription factor PosF21 216 269 - -
Spst6g00202 416 MobiDBLite consensus disorder prediction 140 189 - -
Spst6g00202 416 CDD bZIP_plant_RF2 218 267 IPR044759 GO:0003700|GO:0006355
Spst6g00202 416 SMART brlzneu 213 277 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00202 Spst-Chr6 2039023 2041832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00202 40 416 bZIP Transcription Factor Family AT2G40620 47.711 3.76e-96 291
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Spst6g00202 bZIP_1 4.4e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00202 - - gmx:100775607 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00202 6 2039023 2041832 Spst6g00202 6 2039023 2041832 ECH