Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00185 ATGGGTAATAGCAGGTTCAGATTGTCAGATATGATGCCAAATGCATGGTTCTATAAGCTCAAAGATATGAGCAAATCAAGGAAGAAAAATGGTCCTCATGTTATGAAGAACAGTGTTACCTCACCAACAACCTCCCAAAGATCACATCCAAGATACTCTCATTATTTCTCCATTGAACCAAACATATCTGGTAAGTTATACAACTCTCCTATTTACACTAAACACTCAGACAACATATTCTCTGATTCACCAAGAAGGTCCTCTAAAAGAAGAACTAAGAGAAAAACCATTTATAAGCCTTCTCCCACAGTTGTCTCTTCACCAGTCATAGAAAGTTTTAGTTGCCATTCCACAAATTGGATTAAGCCAACTCAACCTCAGTCTCCTGACTATTATCTCTCCTCCTCAGAGAGTTCTACGGAATCAAATCTCCATGAATATGTTTCATCCGAGTCTGAGTGTGACAAGTTCACTATTCCTGACCTGCTTAATGGGGTAGCCTCTGAATGCAGTTGTAGAGTTAGCTCTTCCACCAATGACATCATCATTGACATGAAAAATGAACCCTTCACCGGAAATTGTGAAAATTTTGATGGGTTCGACACAATTTCACAATTAGGCCTTCCTCCAATATTGACAAAGCCAGTGAAGTTTGATGATAAGGCCACTGAAGCGACTGAGATGAGAAGATCAACTAAATTTGATGAGGCAAAGTCTCATCAATCTGTAGCTGTTAAAGTTAGCAAAGAGGAAAGTAGTAGAACTAAGAGAGAGAGAAAAACCAGTCCAGTAGCTAGAATTTCCTCTGCTAATTCTACAGGTATAAAACTTAGAGTCAATTCTCCAAAACTCGCCAGCAAGAAAGTTCAAGCCTATGCCAGAAGGAGTGTGTCATCGAAAGCAGGCAAGGTCTCAGTGGATACAGGATTTCCAGAGGGATTTGCAGTTGTTAAGTCCTCACTTGATCCACAAAAAGACTTCAGGGAGTCAATGGTGGAGATGATAGTGGAGAACAACATCCGAGCATCAAAAGATTTGGAGAACTTGCTTGCCTGCTATCTTTCGCTGAATTCAAGGGAATACCATGATCTCATTGTCAAAGCATTTGAGCAAATTTGGTATGACATGGTTCTACTCAGAATGTAA 1146 0.3988 MGNSRFRLSDMMPNAWFYKLKDMSKSRKKNGPHVMKNSVTSPTTSQRSHPRYSHYFSIEPNISGKLYNSPIYTKHSDNIFSDSPRRSSKRRTKRKTIYKPSPTVVSSPVIESFSCHSTNWIKPTQPQSPDYYLSSSESSTESNLHEYVSSESECDKFTIPDLLNGVASECSCRVSSSTNDIIIDMKNEPFTGNCENFDGFDTISQLGLPPILTKPVKFDDKATEATEMRRSTKFDEAKSHQSVAVKVSKEESSRTKRERKTSPVARISSANSTGIKLRVNSPKLASKKVQAYARRSVSSKAGKVSVDTGFPEGFAVVKSSLDPQKDFRESMVEMIVENNIRASKDLENLLACYLSLNSREYHDLIVKAFEQIWYDMVLLRM 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00185 381 MobiDBLite consensus disorder prediction 229 263 - -
Spst6g00185 381 MobiDBLite consensus disorder prediction 33 52 - -
Spst6g00185 381 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 124 376 IPR038933 GO:0045892
Spst6g00185 381 Pfam Transcriptional repressor, ovate 320 376 IPR006458 -
Spst6g00185 381 MobiDBLite consensus disorder prediction 26 52 - -
Spst6g00185 381 MobiDBLite consensus disorder prediction 77 100 - -
Spst6g00185 381 MobiDBLite consensus disorder prediction 229 266 - -
Spst6g00185 381 ProSiteProfiles OVATE domain profile. 316 375 IPR006458 -
Spst6g00185 381 Pfam DNA-binding domain 1 47 IPR025830 GO:0003677
Spst6g00185 381 NCBIfam uncharacterized plant-specific domain TIGR01568 314 375 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00185 Spst-Chr6 1930710 1931855 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst6g00185 Ovate 6.9e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00185 - - gmx:100784032 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00185 6 1930710 1931855 Spst6g00185 6 1930710 1931855 ECH
Spst6g00185 6 1930710 1931855 Spst8g00233 8 1976783 1977925 PCT