Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00177 ATGGAGAGTAAACCAAATATGTTAATGCAAAGATATGAGTTAGGAAGATTACTCGGCCAGGGAACCTTTGGAAAGGTTTACTATGCTAGGAGTGCACTAACTAACCAGAGTGTGGCTATTAAAATGATTGACAAAGATAAGATTATGAGAACTGGCCAAGTTGAACAAATCAGGCGTGAAATATCTGTTATGAGATTGGCTAGACACCCCAATATCATACAGCTTTTTGAGGTTATGGCCAACAAGAGTAAGATTTACTTTGTTATGGAATATGCTAAAGGTGGTGAGCTCTTCAACAAGGTGGCCAAAGGAAAGCTCAAGGAAGATGTTGCACATAAGTATTTTAAGCAGCTAATCAATGCTGTAGATTTTTGTCACAGTAGAGGTGTGTACCACCGAGACATAAAGCCTGAGAACATTCTATTGGATGAAAATGGTAATCTAAAGGTCTCTGATTTTGGCCTAAGTGCTCTTGTTGAATCCAAGAGGCAGGATGGTTTACTCCATACTCCTTGTGGCACACCTGCTTATGTTGCTCCTGAAGTCATCAAAAGGAAGGGATATGATGGTACAAAAGCTGATATTTGGTCTTGTGGAATAGTTCTGTTTGTCTTGTTGGCTGGTTATCTCCCTTTTCATGACCCAAATTTGATAGAGATGTATAGGAAGATAAGCAAAGCAGAATTAAAATGTCCTAATTGGTTCCCACCAGAAGTATGCAAGCTATTGGGCATGATGTTGGATCCAAATCCTGACACTAGGATTCCCATATCTAATATTAGGGAACATTCTTGGTTCAAGAAAGGACCAAATGTTAAAAACAAAAGACCTGTAGTGGAAAACAACACTGTCTCTTCTTCAGGTACTGTTCTTCCTGATCAAAATGATTGTGATATTCTAGCAGCAGAAGCAAACGGAGAGTCAGTTGCTCCCTTAAGTATAAATGCCTTTGATATTATCTCCCGTTCTGTGGGTTTTGATCTTTCTAGATTCTTTGATGACAGTTTTCATAAAAAGGAAGCAAGATTTAGTTCAAGGTTACCTGCAAATGCCATCATCTCCAAGCTGGAAGACATTGCTAAGCAACTAAGGATGAAAATAAAGAAAAAAACTGCGGGTTTGTTGAAATTAGAGGGTTCGGATGAAGGTAGAAAGGGAGTTTTGACGATTGATGCAGAGATCTTTCAAGTTACACCTTGTTTCCATTTGGTGGAGGTGAAAAAATCAAATGGAGATACATTGGAATATCAGAAAATATTGAACGATGATATCAGGCCCGCTCTTCAGGATATTGTTTGGGTCTGGCAAAGTGATCAACAACTGCAATCACAACCGTCAGAAGAACAGCAACAACGACATACAGATGACCAGCAGCAACAACTTCTGCAGTCATAA 1395 0.3914 MESKPNMLMQRYELGRLLGQGTFGKVYYARSALTNQSVAIKMIDKDKIMRTGQVEQIRREISVMRLARHPNIIQLFEVMANKSKIYFVMEYAKGGELFNKVAKGKLKEDVAHKYFKQLINAVDFCHSRGVYHRDIKPENILLDENGNLKVSDFGLSALVESKRQDGLLHTPCGTPAYVAPEVIKRKGYDGTKADIWSCGIVLFVLLAGYLPFHDPNLIEMYRKISKAELKCPNWFPPEVCKLLGMMLDPNPDTRIPISNIREHSWFKKGPNVKNKRPVVENNTVSSSGTVLPDQNDCDILAAEANGESVAPLSINAFDIISRSVGFDLSRFFDDSFHKKEARFSSRLPANAIISKLEDIAKQLRMKIKKKTAGLLKLEGSDEGRKGVLTIDAEIFQVTPCFHLVEVKKSNGDTLEYQKILNDDIRPALQDIVWVWQSDQQLQSQPSEEQQQRHTDDQQQQLLQS 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00177 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Spst6g00177 464 ProSiteProfiles NAF domain profile. 309 333 IPR018451 GO:0007165
Spst6g00177 464 MobiDBLite consensus disorder prediction 442 464 - -
Spst6g00177 464 FunFam Non-specific serine/threonine protein kinase 5 304 - -
Spst6g00177 464 SUPERFAMILY Protein kinase-like (PK-like) 8 288 IPR011009 -
Spst6g00177 464 Pfam NAF domain 311 369 IPR004041 GO:0007165
Spst6g00177 464 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00177 464 CDD CIPK_C 315 429 - -
Spst6g00177 464 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00177 464 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00177 464 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Spst6g00177 464 FunFam Non-specific serine/threonine protein kinase 309 433 - -
Spst6g00177 464 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Spst6g00177 464 Gene3D Transferase(Phosphotransferase) domain 1 3 309 - -
Spst6g00177 464 Gene3D Kinase associated domain 1, KA1 310 434 - -
Spst6g00177 464 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 6 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00177 Spst-Chr6 1872519 1873913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00177 1 439 CBL-interacting serine-threonine protein kinases AT5G58380 66.887 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Spst6g00177 Pkinase 4.7e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00177 - K07198 gmx:100790905 816.224