Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00172 ATGCCACTTTCTTCTTTTCCGTCATCTTCTTCTTTCTCTTCATCAGCTAATGTTCTTGCATTAGCTGTGCTATTGCTGCTTCTTAATGCAGGAACCTCTTCGGCTCAACTCTCAGACAACTTCTATTCCAAGAAATGTCCGAATGTTTTCAACACTGTCAAATCTGTTGTTAAATCTGCTGTTGCCAAAGAACCTCGCATTGGAGCCTCTATTCTTCGCCTCTTCTTCCATGATTGCTTTGTTGATGGTTGTGATGGATCATTACTACTTGATGACACTCCATCATTCTTGGGAGAGAAAACTGCAGCCGCTAACAACAATTCAGTGAGAGGTTTTGAAGTAATTGATGCCATCAAGTCCAAGGTGGAGAAACTATGTCCTGGTGTCGTCTCATGTGCTGATATCTTGGCCGTTGCTTCTCGTGATTCTGTTGTTCTTCTTGGAGGGCCATTTTGGAAAGTGAAAGTTGGAAGAAGGGATTCAAGAACAGCAAACTTCACTGCTGCCAACACTGGTGTTATTCCGCCTCCTTCATCTAACCTCACCAACCTTATCACAGCATTTCAAGCTCAAGGACTCTCTGCGAGGGACATGGTTGCCTTATCTGGAGCTCACACAATTGGAAAAGCAAGGTGTACTTCTTTTAGAGATCACATATACAATGGAAGCAACATTGACAGAACATTTGCATCGGCCAGGCAGAGACAGTGTCCAAGGACTAATGGCGTAGGAGACAACAATCTAGCAGTTCTAGACTTCAGAACTCCAACACACTTTGACAACGACTACTTCAAAAACCTCCTCATCAAAAGGGGACTCCTCAATTCTGATCAGGTGCTTTTCAATGGTGGATCCACCGATTCACTGGTCAGAACTTACAGCAAGAATAACAAGGCCTTTGATTCTGACTTTGTTACTGCAATGATCAAGATGGGAAATAACAAACCCTTAACTGGGTCACGAGGGGAGATTAGGAAGAACTGCAGGAGAGTGAATTAA 999 0.4334 MPLSSFPSSSSFSSSANVLALAVLLLLLNAGTSSAQLSDNFYSKKCPNVFNTVKSVVKSAVAKEPRIGASILRLFFHDCFVDGCDGSLLLDDTPSFLGEKTAAANNNSVRGFEVIDAIKSKVEKLCPGVVSCADILAVASRDSVVLLGGPFWKVKVGRRDSRTANFTAANTGVIPPPSSNLTNLITAFQAQGLSARDMVALSGAHTIGKARCTSFRDHIYNGSNIDRTFASARQRQCPRTNGVGDNNLAVLDFRTPTHFDNDYFKNLLIKRGLLNSDQVLFNGGSTDSLVRTYSKNNKAFDSDFVTAMIKMGNNKPLTGSRGEIRKNCRRVN 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00172 332 FunFam Peroxidase 175 311 - -
Spst6g00172 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Spst6g00172 332 PANTHER PEROXIDASE 72-RELATED 34 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 CDD secretory_peroxidase 36 331 IPR033905 GO:0004601|GO:0042744
Spst6g00172 332 ProSiteProfiles Plant heme peroxidase family profile. 36 332 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 ProSitePatterns Peroxidases active site signature. 68 79 IPR019794 GO:0004601
Spst6g00172 332 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 Pfam Peroxidase 53 296 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 SUPERFAMILY Heme-dependent peroxidases 36 332 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst6g00172 332 FunFam Peroxidase 40 181 - -
Spst6g00172 332 Gene3D Peroxidase, domain 2 175 311 - -
Spst6g00172 332 Gene3D - 40 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00172 Spst-Chr6 1836855 1839075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00172 12 332 Peroxidase AT5G58400 64.286 2.43e-152 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00172 K00430 - gmx:100813384 536.184