Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00171 ATGGCTTCAATTATCCAATCACTGCTTGTGCTTGTTCTGGCCACTTTGGCCACATTTATGGTCCCATGCAGTGCACAACTAAGTCCTAATTTCTATAACAAAGTTTGTCCCAAGGCATTGCCAGTCATAAGATCAGTTGTTCAACGAGCAATTGTTCGTGAACCACGCATTGGAGCCTCATTTCTGCGTTTGCATTTCCATGACTGCTTTGTTAATGGATGTGATGGATCAGTTCTGTTGGATGACACAAGGAACTTCACTGGGGAGAAAACAGCCCAGCCAAATCTGAATTCCATCAGAGGGTTTGAAGTGGTTGATGAGATCAAGGCAGCAGTTGACAAAGCTTGCAAACGCCCTGTCGTGTCATGTGCTGATATCTTGGCTACAGCTGCTCGAGATTCTGTGGCCATCTTGGGAGGTCTACACCTATGGTATCCTGTATTACTTGGCAGAAGAGACGCCAGAACTGCGAGCAAAGATGCTGCAAACAACAACCTTCCCGCTCCATTTTTCAGCTTCTCACAGCTTCTCACCAATTTCAACTCTCACGGAATGAACCTCAAGGACTTAGTGGCACTCTCTGGTGGCCACACCATAGGGTTTTCAAGGTGCACCAACTTTAGAGACCGAATCTACAACGACACCAACATCAACCCTACTTTTGCAGCCTCTCTGCGCAGAACATGCCCTAGAGTTGGTGGCGATAACAACTTGGCTCCATTGGACCCAACTCCTGCAATGGTTGACACTTCATACTACAAGGAGTTGCTCTGCAACAAGGGTCTCCTTCACTCTGACCAAGAGCTCTACAAGGGCAATGGCAGTGAAAGTGACAAGTTGGTAAAGCTTTACAGTGAGAACCCTTTTGCATTTGCTAAAGATTTTAAGGCTTCTATTATCAAGATGGGTAACTTGAAGCCTCTCACTGGGAGAAAGGGAGAGATCAGACGCAATTGCAGAAGGGTTTGTAAACTTTATGCAGTTTTCCTACGTTCTTCATTCATTATAGAAAACTACTCTATAGGATCTTTAGATTATTGA 1041 0.4505 MASIIQSLLVLVLATLATFMVPCSAQLSPNFYNKVCPKALPVIRSVVQRAIVREPRIGASFLRLHFHDCFVNGCDGSVLLDDTRNFTGEKTAQPNLNSIRGFEVVDEIKAAVDKACKRPVVSCADILATAARDSVAILGGLHLWYPVLLGRRDARTASKDAANNNLPAPFFSFSQLLTNFNSHGMNLKDLVALSGGHTIGFSRCTNFRDRIYNDTNINPTFAASLRRTCPRVGGDNNLAPLDPTPAMVDTSYYKELLCNKGLLHSDQELYKGNGSESDKLVKLYSENPFAFAKDFKASIIKMGNLKPLTGRKGEIRRNCRRVCKLYAVFLRSSFIIENYSIGSLDY 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00171 346 Gene3D Peroxidase, domain 2 167 302 - -
Spst6g00171 346 ProSiteProfiles Plant heme peroxidase family profile. 26 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 Pfam Peroxidase 44 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Spst6g00171 346 PANTHER PEROXIDASE 72-RELATED 22 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 Gene3D - 30 320 - -
Spst6g00171 346 CDD secretory_peroxidase 26 322 IPR033905 GO:0004601|GO:0042744
Spst6g00171 346 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Spst6g00171 346 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00171 346 FunFam Peroxidase 167 302 - -
Spst6g00171 346 FunFam Peroxidase 30 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00171 Spst-Chr6 1825386 1827243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00171 25 322 Peroxidase AT5G05340 59.136 6.32e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00171 K00430 - gmx:100816056 568.155