Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00170 ATGGCTTCTCATCTCCAATATTTCCTTGTTCTTGCCATGGCCACACTTCTCATAATCCCTTCTCATGCACAGCAACTCACACCTGATTTTTACAACACCGTTTGCCCTCAGGCACTTCCAGTCATTAAGTCAGTTGTTCAAAGAGCCATATTCCGTGAACGTCGTATGGGAGCCTCTTTACTGCGTTTGCACTTCCATGACTGTTTTGTCAATGGTTGTGATGGATCAGTTCTGCTGGATGACACCCCCAATTTCACAGGGGAGAAGACTGCACTCCCAAATATTGGCTCAATTAGAGGTTTGGAGGTGGTCGATGAAATCAAAGCAGCGGTTGACAAAGCTTGCAAACGTCCTGTTGTATCATGTGCAGATATCTTAGCAATTGCTGCTCGTGATTCTGTGTCCATTTTGGGAGGTTCACTCTATTGGTACAAGGTGGCATTAGGCAGAAGGGATGCAAGAACTGCTAGCAAGGATGCTGCAAACTCAAATCTTCCTGCCCCATTTTTCAGCCTCTCCCAGCTTCTTTCAAATTTCCAATCTCATGGACTTGACCTTAAAGATCTCGTAGCTCTTTCTGGTGCACACACCATTGGATTTGCTCACTGCTCTACCTTTCGGAACAGGATCTACAATGACACCAACATAGACCCCAACTTTGCATCTTCCTTGCAGGGCACGTGCCCTAAAAGTGGTGGAGATAGTAATCTGGCACCATTGGATCGTGCCACTCCCACAAGAGTTGACACTTTATACTATACTGCTTTGCTACGTAAAAAGGGTCTCCTTCATTCTGATCAAGAGCTCTTCAAAGGAGATAGAAGTGAAAGTGACACTTTGGTGAAGCTCTACAGCACTGACCCCTTTGCTTTTGCAACAGATTTCAAAGCTTCCATAATCAAGATGGGTAACATTAAGCCTCTTACTGGGAACGATGGAGAGATCAGAGTAAACTGTAGAAGAGTCAACTAA 972 0.4486 MASHLQYFLVLAMATLLIIPSHAQQLTPDFYNTVCPQALPVIKSVVQRAIFRERRMGASLLRLHFHDCFVNGCDGSVLLDDTPNFTGEKTALPNIGSIRGLEVVDEIKAAVDKACKRPVVSCADILAIAARDSVSILGGSLYWYKVALGRRDARTASKDAANSNLPAPFFSLSQLLSNFQSHGLDLKDLVALSGAHTIGFAHCSTFRNRIYNDTNIDPNFASSLQGTCPKSGGDSNLAPLDRATPTRVDTLYYTALLRKKGLLHSDQELFKGDRSESDTLVKLYSTDPFAFATDFKASIIKMGNIKPLTGNDGEIRVNCRRVN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00170 323 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601|GO:0042744
Spst6g00170 323 PANTHER PEROXIDASE 72-RELATED 23 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 Pfam Peroxidase 43 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Spst6g00170 323 Gene3D Peroxidase, domain 2 166 302 - -
Spst6g00170 323 FunFam Peroxidase 166 302 - -
Spst6g00170 323 SUPERFAMILY Heme-dependent peroxidases 25 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 Gene3D - 29 320 - -
Spst6g00170 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Spst6g00170 323 FunFam Peroxidase 29 173 - -
Spst6g00170 323 ProSiteProfiles Plant heme peroxidase family profile. 25 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Spst6g00170 323 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00170 Spst-Chr6 1814828 1816593 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00170 25 323 Peroxidase AT5G05340 58.804 9.11e-122 351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00170 K00430 - gmx:100816580 566.229