Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00165 ATGCCTTCTACTACTCTTCAATGGCTAAGCCTTGTTGGCATCATTTGGCTCCAAGCCATAATTGGGACAAACACTAACTTCCCTGCTTACTCTTCCGAGCTAAAGCAATTTCTTTCCATTTCCCAAGTCCAACTCAATAACCTTGCCTTTGCCTCTGATGCAGGCAAGCTTTTTGGCTGGTTTTCTGGCCTAGCTTCTGTTTACCTCCCCCTTTGGCTTGTCCTCTTGATTGGTTCAACTCTTGGCTTAATTGGTTATGGTGTGCAATATCTCTTCATAACCCGCCAAATTTCCTCTTTGTCCTTTTGGCATGTGTTCTTTCTAACTTTTCTTGCTGGCAATAGCATTTGTTGGATCAACACAGTGTGCTATGTTGTCACCATAAGGAACTTCCTATCAGATCGCCAAGTTGCCGTGGGAATAACAACTAGCTACCAAGGACTAAGTGCGAAGATTTATGCCAACGTTGTTGATGCTGTTTTTCCTGACAAAAAGGCTAAAGCATTTCTCTTCCTGAACTCTCTCTTACCTGTGATAGTTGGCCTAATAGCAGCTCCTCTAGTCAGAGAAATTGATGCCACAAGTCCTAAACACACGCGTGTTGGGTTTGCTGTGATGTTTGCCATAACAATTTCCACTGGAATATATGCTGTGTTGAGTAGCTTGCAATTTATCACAAGCAAAGCATCTTCACTAGGTATCATGACTGGTATTCTTTTGTCCCTTCTCTTGCCTCTTCTAGTCCCACTCTCAGTGAAGATCAAGGAACTAAAGGAAAATAGAGAAAAATTGAGAGTCTACCATTTTACCACGGAGGAGAATAATAGTGAAGAAAGGATGAAGAACGAGGTGAAAGAGGGTGAAGTTCAAGAAGAGGTTGGTATTATAGAAGAAGTTGGAGTGAAGTTGATGCTGAGAAAAATAAATTTCTGGTTATATTTCTTGGTTTATTTTTTCGGTGCAACAGTAGGTTTAGTATATCTTAATAACTTGGGGCAAATAGCTGAATCCCGGGGTTGCTCTAACACTTCATCTTTGGTATCTTTGTCATCATCATTTGGGTTCTTTGGCCGTCTTATGCCATCTCTTATGTACTACTTCTACAGTGGAAAATGTAGACTTTCAAGACCTGCTTCTCTGTTGGCAGTGATGGTTCCAACATCAGGTGCATTTTTCCTACTTCTGAACAAAACAGACCTTGCCCTTTACATCAGCACTGCAGTGATTGGAGTGTGCACTGGAGCAATCACTTCCATTGCTGTTTCCACAACCACTGAGCTATTTGGTACCCAGCATTTCTCAGTGAACCATAATGTGGTGGTGGCCAACATTCCTATTGGCTCCTTCCTATTTGGCTATTCAGCTGCACTTATTTACCGTAAGGAAGAAGATGGACATGGACATGATGATCAAGGGCAATGCATGGGCATGGAATGCTACAGAAACACTTTTATCATATGGGGTTCCTTCTGTTTCCTTGGAACTCTTTTGGCTTTGATTCTTCATGCTAGGACTCGCAAGTTTTATTCACAAAAACAATAG 1542 0.417 MPSTTLQWLSLVGIIWLQAIIGTNTNFPAYSSELKQFLSISQVQLNNLAFASDAGKLFGWFSGLASVYLPLWLVLLIGSTLGLIGYGVQYLFITRQISSLSFWHVFFLTFLAGNSICWINTVCYVVTIRNFLSDRQVAVGITTSYQGLSAKIYANVVDAVFPDKKAKAFLFLNSLLPVIVGLIAAPLVREIDATSPKHTRVGFAVMFAITISTGIYAVLSSLQFITSKASSLGIMTGILLSLLLPLLVPLSVKIKELKENREKLRVYHFTTEENNSEERMKNEVKEGEVQEEVGIIEEVGVKLMLRKINFWLYFLVYFFGATVGLVYLNNLGQIAESRGCSNTSSLVSLSSSFGFFGRLMPSLMYYFYSGKCRLSRPASLLAVMVPTSGAFFLLLNKTDLALYISTAVIGVCTGAITSIAVSTTTELFGTQHFSVNHNVVVANIPIGSFLFGYSAALIYRKEEDGHGHDDQGQCMGMECYRNTFIIWGSFCFLGTLLALILHARTRKFYSQKQ 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00165 513 SUPERFAMILY MFS general substrate transporter 11 507 IPR036259 -
Spst6g00165 513 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 510 - -
Spst6g00165 513 Pfam Nodulin-like 7 249 IPR010658 -
Spst6g00165 513 CDD MFS_Mch1p_like 6 495 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00165 Spst-Chr6 1774303 1776079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00165 1 512 Nodulin-like Gene Family AT2G30300 48.566 8.66e-153 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00165 - - gmx:100800763 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00165 6 1774303 1776079 Spst6g00165 6 1774303 1776079 ECH
Spst6g00165 6 1774303 1776079 Spst8g00207 8 1756992 1758737 PCT