Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00162 ATGGCACCTCAAAAGGCATCCTTCAAGCTTGACATGAAAGAAGTTGTACTTATCAAACCATCAAAACCAACGCCTTCCTCTTTTCTTTCTCTGTCTACAATAGATAACATACCTGATCTTAATAGCCTGTGTCAAACGGTTCATGTGTATCGATCAGCAACTCATGATTATGATGAACCTGGTTGTCCTAATGGTCAATTCCTAGATCCTGTTCAAGTGATCAAAGCAGCACTTTCAAAGGCTTTATTCTATTATTACCCTCTTGCAGGTAGGCTAGTAAAGCACACTGATGGAAAGCTTAGGATCAATTGCAGTGCAGAAGGTGTTCCATTCTTGGAAGCCAACGCTAGTTGCCACCTTTCTTCTCTTCATTACTTGGATGGCACCGACATGGAAAGTGCAAAACATTTGGTGTTTGACCTACCCTGTCAAGATAAAAGTGGCGACCAATATCCTTTGGTGTTCAAGGTGACAAAGTTTCCTTGTGGGGGGTTTACCATTGGAATGGGGCTGTCACATGCTGTTTGTGATGGCGTTGGAGCGTCCCAGTTCTTCAGAGCCATCATTGAGCTTGCAAGGGGGAAAAGTGAGCCCTCTGTGAAGCCTGTGTGGGAGAGAGAGAGGCTAGTGGGATCAATCACTGAACATCCATTGCAAATTGATTCTCTTGATGAGGCCTCAACTGCAGTTTCACCCTTTCTTCCAACCAAAGTTCTCATGCATGAGTGCATTAAGGTGGACAGTGAGAGCATCAGAGGACTCAAGATGAGTTTGATGAAGGAATCAGGTGACAATGAAAGCTTCACTAGTTTTGAATCACTTGCTGCATATGTGTGGAGATCAAGATCTAGGGCCTTAAAAATGAGCGATGATGGGAAAGTTATGCTGAATATCACAGTTGGGGTTAGAAGGAACTTGCTTGATCCTTTGCCTGAAGGGTATTATGGAAATGCTGTTGTGGATGCTGAGGTTATTCTAACAATGAGGGAACTCAACGAAAGGCCACTCTATGAGGTTGTGAAGCTCATTCGAGAAAGCAAGAGGGTTGCTTGTAACAGTGGTTATGTCAGAAACTTCATCGACACTTTAGAGACAGAACAAAAGGATTTCAACCTTGAAGGGAGTGGTTCATTCACTACCATGACAGATTGGAGGAATTTGGGGTTTTTGGAAAAGGTAGATTTTGGATTTCAGGAACTTGTGAATACTGTACCAGCCCCTCGTGACATGTTTGAATCCGTTGATTTATGCATTTTCTCACCTCTTTGCAACTTGGATTCTTCAATGAAAGGAGGGTTTAGGATTTTTGTGTCCCTCCCAAGTGCTGCATTGCTCAAGTTCAAGGAGGAGATGGAGGCTCTCAACCTTTTGATTTGA 1377 0.4321 MAPQKASFKLDMKEVVLIKPSKPTPSSFLSLSTIDNIPDLNSLCQTVHVYRSATHDYDEPGCPNGQFLDPVQVIKAALSKALFYYYPLAGRLVKHTDGKLRINCSAEGVPFLEANASCHLSSLHYLDGTDMESAKHLVFDLPCQDKSGDQYPLVFKVTKFPCGGFTIGMGLSHAVCDGVGASQFFRAIIELARGKSEPSVKPVWERERLVGSITEHPLQIDSLDEASTAVSPFLPTKVLMHECIKVDSESIRGLKMSLMKESGDNESFTSFESLAAYVWRSRSRALKMSDDGKVMLNITVGVRRNLLDPLPEGYYGNAVVDAEVILTMRELNERPLYEVVKLIRESKRVACNSGYVRNFIDTLETEQKDFNLEGSGSFTTMTDWRNLGFLEKVDFGFQELVNTVPAPRDMFESVDLCIFSPLCNLDSSMKGGFRIFVSLPSAALLKFKEEMEALNLLI 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00162 458 PANTHER ACYL TRANSFERASE 4 8 452 - -
Spst6g00162 458 Pfam Transferase family 9 453 - -
Spst6g00162 458 Gene3D - 5 219 IPR023213 -
Spst6g00162 458 Gene3D - 232 451 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00162 Spst-Chr6 1752275 1753651 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00162 9 397 Monolignol Biosynthesis Gene Families AT5G48930 29.455 1.52e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00162 K20240 - gmx:100801843 536.184