Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00160 ATGGAGACTGATGCTGACTCAAGTGATAGTTCTCTCATTCTGCTCAAGCAAGGAGCTGAAGCTAGGGTTTTTGAGTCTTCTTTTGTGGGAAGGAAATCCATTGTCAAGGAACGCTTCTCAAAGAAGTACAGGCACCCAACTTTGGATTCAAAATTGACCCTCAAGCGCTTAAATGCGGAGGCTAGGTCCATGACCAAAGCAAGGCGACTTGGGGTTTGTACTCCTGTGCTGTATGCAGTGGATCATGTGTTGCACACTTTAACATTTGAATATGTTGCTGGCCCTTCTGTCAAAGATGTGTTTCTTGAATTTGGGTCACATGGGATTGATAAAGAGTGGCTGGACAATATTGCATCCCAAATTGGTGATGCAATTGGGAAGTTACATGACGGTGGTCTTGTACATGGTGATTTAACAACATCAAACATGTTATTGAAGAGTGATACCAAGCAGTTGGTTCTTATTGATTTTGGTCTTAGCTTCACTTCAACTCTACCAGAAGATAAAGCTGTTGATTTGTATGTTCTGGAAAGATCTCTTATCTCAATGCATTCGTCTTGTGGGGATGTGATGGATCAAATTCTTGCTGCATACAGGAAGTCATCAAAACAGTGGTCATCCACATTGAACAAGCTAGCACAAGTGCGACAAAGAGGAAGGAAGAGGACCATGGTTGGATGA 681 0.4244 METDADSSDSSLILLKQGAEARVFESSFVGRKSIVKERFSKKYRHPTLDSKLTLKRLNAEARSMTKARRLGVCTPVLYAVDHVLHTLTFEYVAGPSVKDVFLEFGSHGIDKEWLDNIASQIGDAIGKLHDGGLVHGDLTTSNMLLKSDTKQLVLIDFGLSFTSTLPEDKAVDLYVLERSLISMHSSCGDVMDQILAAYRKSSKQWSSTLNKLAQVRQRGRKRTMVG 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00160 226 FunFam Protein kinase superfamily protein 107 223 - -
Spst6g00160 226 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 5 226 IPR022495 GO:0004674
Spst6g00160 226 Gene3D Transferase(Phosphotransferase) domain 1 108 223 - -
Spst6g00160 226 SMART serkin_6 9 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00160 226 ProSitePatterns Tyrosine protein kinases specific active-site signature. 133 145 IPR008266 GO:0004672|GO:0006468
Spst6g00160 226 FunFam TP53-regulating kinase isoform X1 20 92 - -
Spst6g00160 226 Gene3D Phosphorylase Kinase; domain 1 20 92 - -
Spst6g00160 226 NCBIfam KEOPS complex kinase/ATPase Bud32 18 220 IPR022495 GO:0004674
Spst6g00160 226 Pfam Protein kinase domain 42 162 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst6g00160 226 SUPERFAMILY Protein kinase-like (PK-like) 15 175 IPR011009 -
Spst6g00160 226 ProSiteProfiles Protein kinase domain profile. 9 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00160 Spst-Chr6 1743896 1750991 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00160 17 167 MAP Kinase Kinase Kinase AT3G27560 24.503 5.62e-06 44.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Spst6g00160 Pkinase 3.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00160 K08851 - gmx:100782376 407.142