Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00159 ATGGAAAACCTAAAGACATCCTTTGTTCTTGATATGAAGGATGTTGTAATAGTTAAACCCTCCAAGCCCACACCATGTGAGCTTCTTTCTCTGTCCACCATTGACAGGGATCCAGTTCTCAACATTCTGTGTCAAACCATTTATGTTTACAAAGCAAATCTTGATTCCCCAAATGCCCAACTAGATCCTGGTCATGTGATAAAAGAAGCTCTCTCAAAGGTTTTGGTTTACTATTATCCTCTTGCTGGGAAGATAATAACATTTGATGATGGAAAACTTGGAATCAACTGCAATGCCGAAGGAGTTCCATTCTTGGAGGCAAGTGCTAACTGTGAACTGTCTTCTCTTCACTATCTAGAAGGGATTGATGTTACAACAGCACAGAAATTGGTGTTTAATAATGATAACCATTCTCAAGATGAAACTAGTCACCATGCCTTGGCTTTCAAGGTGACCAAGTTTCTCTGCGGAGGTTTCACTATTGGAATGGGGTTGTCACACAGTGTTTGTGATGGGTTTGGTGCATCTCAATTCTTCAGAGCTCTGGCTGAACTTGCATGTGGAAAAAGTGAGCCCTCAGTGAAGCCTGTGTGGGAGAGGGAGAGACTCATGGGGACGCTTCTTAAGGAACCACTCCAATTTCCCTTTGATAAGACTTCAAGGGCAGTTTCACCATTTTGGCCAACTACGGAGATTTCACATGAATGCTTTAACTTCAACGGTAAGAGCATACAAAGACTCAAAATGGAACTGATGAAGGAAAGTGATGATGTGCAGGAAAGCTTCACAACTGTTGAAACACTTGGAGCCTATGTTTGGAGGTCAAGGGCTAGAGCTTTGGAATTGAACTCTGACGGGAAAACTATGTTGTGTTTAGCAGTAGGGGTGAGACGCCTGTTGGATCCACCCTTGCCTGAAGGGTATTATGGGAATGCTTTTGTGGGTTCAAATGTGGTGCAAACAGTGAAAGAACTTGATGAAAGACCACTCTCAGAGGTTGTGAAGCTCATCAAAGAGAGCAAAAAGCTTCCTTCCAATAATGAGTACATCAGAAACACAATAAACATGCTGGAGACAATGAGACAAAGGAACATAAGGATTGAAGGAACATGTGCATCTGTGGTGTTAACAGATTGGAGGCAGCTAAGTTTGTTGGAAGAAGTGGATTTTGGATGGAAGGCTTCGGTAAATATAGTACCAGTTCCATGGAACATGTTAGGGTATGTGGACTTGTGCCTTTTCTTGCCTCCTAGTAACTTGGATACTTCAATGAAAGGAGGAGTTAGGGTCTTTGTTTCCCTCCCCAAAGCTTCCATGCCCAAGTTTAGGGAGGAGATGGATGCACTAAAGCCTACAAGGGCTGATGAGAGTAGCACCTAG 1380 0.429 MENLKTSFVLDMKDVVIVKPSKPTPCELLSLSTIDRDPVLNILCQTIYVYKANLDSPNAQLDPGHVIKEALSKVLVYYYPLAGKIITFDDGKLGINCNAEGVPFLEASANCELSSLHYLEGIDVTTAQKLVFNNDNHSQDETSHHALAFKVTKFLCGGFTIGMGLSHSVCDGFGASQFFRALAELACGKSEPSVKPVWERERLMGTLLKEPLQFPFDKTSRAVSPFWPTTEISHECFNFNGKSIQRLKMELMKESDDVQESFTTVETLGAYVWRSRARALELNSDGKTMLCLAVGVRRLLDPPLPEGYYGNAFVGSNVVQTVKELDERPLSEVVKLIKESKKLPSNNEYIRNTINMLETMRQRNIRIEGTCASVVLTDWRQLSLLEEVDFGWKASVNIVPVPWNMLGYVDLCLFLPPSNLDTSMKGGVRVFVSLPKASMPKFREEMDALKPTRADESST 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00159 459 Gene3D - 7 214 IPR023213 -
Spst6g00159 459 Gene3D - 228 446 IPR023213 -
Spst6g00159 459 Pfam Transferase family 16 448 - -
Spst6g00159 459 PANTHER ACYL TRANSFERASE 4 8 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00159 Spst-Chr6 1739947 1741326 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00159 10 409 Monolignol Biosynthesis Gene Families AT5G48930 26.555 1.61e-37 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00159 K20240 - gmx:100801843 829.706
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00159 6 1739947 1741326 Spst6g00159 6 1739947 1741326 ECH