Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst6g00153 ATGAAGCTTCTTGTGAGTTTGTTTGAAAAGAAGCATAACTGCTGGAGCCGGATTATTGCGTTGAAAATTCAAGATTTTTACGAAGTTTCATCTCCAAATGATCCTCCCTGCGTGAAGGCAGTTCCTAGCAATGGAAGCATAATCCTTGTCTGCATGACACTGTTATGGTCATTTTCTCTTAACCGCTCTCATGAAGGTCCATCCATGGAGGTAGGCCAGAAAAACATCTTTAGTGGTGGAACCAATAATGCAGAGGCATTTGGAGGATCTTTCATTTGCCACAGCACAGTTAATCAAATCAACTCCAAGGGAATCTGGTTTGGGGATGATCCACTTACACATTATCTCCCAGTTTTCTTGGTCCAACTTTTTCTCATGTTCATCTTCACCCATATGTTTTACCTTATCATCAAGCCCCTTGGTCAACCGTCTTTTGTTTCTCAAGTTCTTGGTGGTGTAACTTTAGGTCCTTCTTTTCTTGGGCTCAATACAACATTTGCTGATAAGATAGATCCAGCCATCGCTTTTAGATCAGGTAAAAGGACTTATGCCATAGGAATTTTAGGGTACTTTGTTCCTTACTTATTTTCCAAAGTGGTTGTCTATATCCTCACACGTTCTGGCTCATTGGATCATGATGTTTCTGTGATGCTCCCTATTGTGATAGAAGTTCAATGCATCACAGCCTTTCCTGTAATTACTCGCTTTCTTTCTGAACTTCAGATCCTCAATTCAGAGATTGGAAGGTTGGCCACTTCTTCTTCATTAGTTTCTGAGGTTTGCTACATGTTAAACATCACAGTAACATTTTTTATGAGATTATCTTTGACAAAGTCAATAGTAGTATCTATTGGATCCTTCCTGTCCACCGCTCTACTTGCTGTATTCGTCATCTTTGTAATTCACCCTGTTGCGTTATGGGCAATTCAACAATCACCAGAAGGAAAACCTGTCCAGGAAATTTATATCAGTGGAGTTCTCCTAACACTATTGTTATGTGGACTCCTAGGTGAAATCATTGGCATAAATGCACTCATTGTATCTTTCTGTATAGGGCTAGCTATACCAGATGGTCCACCCTTGGGAGCAGCATTGGTAGATAAGCTTGATTGCTTCGTCTCATTAGTGTTTCTACCCATGCTTTTTCTTATAGTTGGACTAAGGACAGATGTGTATGCCATACAGAAGATGAAGAATATAGCCGGAATTGAATTAGTTATTTGCGCTGCTTTTTGTGGGAAAATTTTAGGGGCTTTGTTGCCTCTCCTTTACCTTAGGGTGCCAATTCGAGATGCCTTTTCTCTTGGTTTTATATTGAACATCAAAGGCACTGTTGAAATGGCCGTGTTGATTGACTTGAAATTGAAAAAAATGATGAATGATGAATGTTTTACAATTATGGTTCTTACTTTACTGTTCATATCCGTATTTGTGTCACTTATTGTGAAAGCTCTATACGATCCTTCTAAGAGGTTTCTTGCTTACAAAAGGAGGACAATTATGCATCAGCAAAGTGTTGAACAATTTCGCATACTAGCTTGCATTCATAAAGAAGATAATGTTTTGGCTATTTTAAACCTCCTTTCAGCTTCCAATTCAAATGAAGCAAGCCCTATTGATTTAGTTGTGCTTCAACTTATTAAGCTTGTGGGGCGATCTTCCTCTCTTCTTGTTGCTCATGTGCCGCGTAAAATGTCTGCTAAACACCCCACTCAAACTGAGAAGATTTTTAACTCATTCACCAAGTTTGCAGATGCATACAAGGAGAAGGTCACACTACATTACTACAAGGGCATTTCTCCCTATGCTACAATGCACAATGATGTGTGCTACTTGGCACTTGAAAAGAGAACAACTTTTATTATAATACCCTTTCACAAGCAGTGGATACTTGGAAGGGCAACCGACTCATTTGTTCCATTTCAGCAACTAAACAAGAAGGTTTTAGAGAAAGCTCCTTGCTCAGTTGGTGTCCTCATTGATCGTGGCACTCAGAAAAAGTTTTGGTGTGGCTACGCAAAGGAATCAAGTTATCAAGTGGCTATGCTTTTCTTTGGGGGTGCAGATGATCGAGAAGCCCTTTCATATGCAAGGCGTATGTTAGATCAACCTTATGTCCACATCACACTCTTTCATTTTACGTCTCCAACTCAGATTGTTGGAGGAACAGAAAGAAGCAAAATGCTTGACACACAAATCTTGAGTGAATTCAGGCTTAAGGCCTTCCAAAATGAGAGAGTTTCTTTCAAAGATGAGACGATATTGAATGGAAGAGATGTAATTACAGTTTTTGAATACATGGATAGTTGTCATGACCTTGTCATGGTTGGGAGGAGGCATGCAGATTCAAAAGTAATGTCAGAACTTTACAAATGGAAGCATGGGGAGTTGGGAGTTGTTGGAGAGGTTCTTGTCTCTTACAATGTTGGAGCCCAAACATCTATTTTGGTGGTGCAACAACAAATCAAATATTGGGGATCACGTGATACAGAGGAGTCATACATTTAA 2508 0.3959 MKLLVSLFEKKHNCWSRIIALKIQDFYEVSSPNDPPCVKAVPSNGSIILVCMTLLWSFSLNRSHEGPSMEVGQKNIFSGGTNNAEAFGGSFICHSTVNQINSKGIWFGDDPLTHYLPVFLVQLFLMFIFTHMFYLIIKPLGQPSFVSQVLGGVTLGPSFLGLNTTFADKIDPAIAFRSGKRTYAIGILGYFVPYLFSKVVVYILTRSGSLDHDVSVMLPIVIEVQCITAFPVITRFLSELQILNSEIGRLATSSSLVSEVCYMLNITVTFFMRLSLTKSIVVSIGSFLSTALLAVFVIFVIHPVALWAIQQSPEGKPVQEIYISGVLLTLLLCGLLGEIIGINALIVSFCIGLAIPDGPPLGAALVDKLDCFVSLVFLPMLFLIVGLRTDVYAIQKMKNIAGIELVICAAFCGKILGALLPLLYLRVPIRDAFSLGFILNIKGTVEMAVLIDLKLKKMMNDECFTIMVLTLLFISVFVSLIVKALYDPSKRFLAYKRRTIMHQQSVEQFRILACIHKEDNVLAILNLLSASNSNEASPIDLVVLQLIKLVGRSSSLLVAHVPRKMSAKHPTQTEKIFNSFTKFADAYKEKVTLHYYKGISPYATMHNDVCYLALEKRTTFIIIPFHKQWILGRATDSFVPFQQLNKKVLEKAPCSVGVLIDRGTQKKFWCGYAKESSYQVAMLFFGGADDREALSYARRMLDQPYVHITLFHFTSPTQIVGGTERSKMLDTQILSEFRLKAFQNERVSFKDETILNGRDVITVFEYMDSCHDLVMVGRRHADSKVMSELYKWKHGELGVVGEVLVSYNVGAQTSILVVQQQIKYWGSRDTEESYI 835
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst6g00153 835 PANTHER CATION/H + ANTIPORTER 93 822 - -
Spst6g00153 835 Gene3D - 118 493 IPR038770 -
Spst6g00153 835 Pfam Sodium/hydrogen exchanger family 125 482 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst6g00153 Spst-Chr6 1701759 1706680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst6g00153 80 829 Antiporter Super Family AT2G13620 34.745 2.90e-150 459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst6g00153 K26731 - gmx:102665255 1147.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst6g00153 6 1701759 1706680 Spst6g00153 6 1701759 1706680 ECH
Spst6g00153 6 1701759 1706680 Spst8g00194 8 1629396 1629797 PCT